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First Investigation of Microbial Community Composition in the Bridge (Gadeok Channel) between the Jinhae-Masan Bay and the South Sea of Korea

Ocean science journal : OSJ, v.53 no.2, 2018년, pp.251 - 260  

Lee, Jiyoung (Department of Marine Science, Incheon National University) ,  Lim, Jae-Hyun (Marine Environmental Impact Assessment Center, National Institute of Fisheries Science) ,  Park, Junhyung (3BIGS) ,  Youn, Seok-Hyun (Oceanic Climate & Ecology Research Division, National Institute of Fisheries Science) ,  Oh, Hyun-Ju (Oceanic Climate & Ecology Research Division, National Institute of Fisheries Science) ,  Kim, Ju-Hyoung (Faculty of Marine Applied Biosciences, Kunsan National University) ,  Kim, Myung Kyum (Department of Bio and Environmental Technology, College of Natural Science, Seoul Women's University) ,  Cho, Hyeyoun (Department of Marine Science and Convergence Engineering, Hanyang University) ,  Yoon, Joo-Eun (Department of Marine Science, Incheon National University) ,  Kim, Soyeon (Department of Marine Science, Incheon National University) ,  Markkandan, Kesavan (TheragenEtex CO.) ,  Park, Ki-Tae (Division of Polar Climate Sciences, Korea Polar Research Institute, KIOST) ,  Kim, Il-Nam (Department of Marine Science, Incheon National University)

Abstract AI-Helper 아이콘AI-Helper

Microbial community composition varies based on seasonal dynamics (summer: strongly stratified water column; autumn: weakly stratified water column; winter: vertically homogeneous water column) and vertical distributions (surface, middle, and bottom depths) in the Gadeok Channel, which is the primar...

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참고문헌 (20)

  1. Andrews S (2010) FastQC: a quality control tool for high throughput sequence data. Babraham Bioinformatics. http://www.bioinformatics.babraham.ac.uk/projects/fastqc Accessed 26 Apr 2010 

  2. Bolger AM, Lohse M, Usadel B (2014) Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 30(15):2114-2120 

  3. Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Pena AG, Goodrich JK, Gordon JI (2010) QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7(5):335-336 

  4. Gilbert JA, Dupont CL (2011) Microbial metagenomics: beyond the genome. Ann Rev Mar Sci 3:347-371 

  5. Jang S-T, Jeon D, Shin C-W (2008) Seasonal variations of physical conditions and currents in the sea near Gadeok-Sudo. Ocean Polar Res 30:33-46 

  6. Kim D, Lee C-W, Choi S-H, Kim YO (2012) Long-term changes in water quality of Masan Bay, Korea. J Coastal Res 28(4):923-929 

  7. Kim NS, Kang H, Kwon M-S, Jang H-S, Kim JG (2016) Comparison of seawater exchange rate of small scale inner bays within Jinhae Bay. J Korean Soc Mar Environ Energy 19(1):74-85 

  8. Klindworth A, Pruesse E, Schweer T, Peplies J, Quast C, Horn M, Glockner FO (2013) Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies. Nucleic Acids Res 41(1):e1 

  9. Lim H-S, Diaz RJ, Hong J-S, Schaffner LC (2006) Hypoxia and benthic community recovery in Korean coastal waters. Mar Pollut Bull 52:1517-1526 

  10. Lim YW, Schmieder R, Haynes M, Willner D, Furlan M, Youle M, Abbott K, Edwards R, Evangelista J, Conrad D (2013) Metagenomics and metatranscriptomics: windows on CF-associated viral and microbial communities. J Cyst Fibros 12(2):154-164 

  11. Liu J, Fu B, Yang H, Zhao M, He B, Zhang X-H (2015) Phylogenetic shifts of bacterioplankton community composition along the Pearl Estuary: the potential impact of hypoxia and nutrients. Front Microbiol 6:64 

  12. Logue JB, Findlay S, Comte J (2014) Editorial: microbial responses to environmental changes. Front Microbiol 6:1364 

  13. Moon H-B, Yoon S-P, Jung R-H, Choi M (2008) Wastewater treatment plants (WWTPs) as a source of sediment contamination by toxic organic pollutants and fecal sterols in a semi-enclosed bay in Korea. Chemosphere 73(6):880-889 

  14. Paerl HW, Dyble J, Moisander PH, Noble RT, Piehler MF, Pinckney JL, Steppe TF, Twomey L, Valdes LM (2003) Microbial indicators of aquatic ecosystem change: current applications to eutrophication studies. FEMS Microbiol Ecol 46(3):233-246 

  15. Palenik B, Brahamsha B, Larimer FW, Land M, Hauser L, Chain P, Lamerdin J, Regala W, Allen EE, McCarren J, Paulsen I, Dufresne A, Partensky F, Webb EA, Waterbury J (2003) The genome of a motile marine Synechococcus. Nature 424:1037-1042 

  16. Parmar TK, Rawtani D, Agrawal Y (2016) Bioindicators: the natural indicator of environmental pollution. Front Life Sci 9(2):110-118 

  17. Seo J-H, Kang I, Yang S-J, Cho J-C (2017) Characterization of spatial distribution of the bacterial community in the South Sea of Korea. PLoS One 12(3):e0174159 

  18. Simon C, Daniel R (2011) Metagenomic analyses: past and future trends. Appl Environ Microb 77(4):1153-1161 

  19. Zakrzewski M, Proietti C, Ellis JJ, Hasan S, Brion M-J, Berger B, Krause L (2016) Calypso: a user-friendly web-server for mining and visualizing microbiome-environment interactions. Bioinformatics 33(5):782-783 

  20. Zhang J, Kobert K, Flouri T, Stamatakis A (2014) PEAR: a fast and accurate Illumina Paired-End reAd mergeR. Bioinformatics 30(5):614-620 

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