[논문]The complete chloroplast genome of Daphne kiusiana, an evergreen broad-leaved shrub on Jeju Island

Cho, Won-Bum; Han, Eun-Kyeong; Choi, Goya; Lee, Jung-Hyun

doi:10.1007/s12686-017-0774-5

The complete chloroplast genome of Daphne kiusiana, an evergreen broad-leaved shrub on Jeju Island

Conservation genetics resources, v.10 no.1, 2018년, pp.103 - 106

Cho, Won-Bum , Han, Eun-Kyeong , Choi, Goya , Lee, Jung-Hyun

Abstract ▼ AI-Helper

Plants of Daphne kiusiana on Jeju Island exhibit morphologically and genetically unique traits. Its taxonomic entity is still unclear and populations are decreasing in size because of human activity. Taxonomic delimitation and conservation efforts are required at the genomic level. We determined the complete chloroplast (cp) genome of this endangered species on Jeju Island, South Korea. Its sequence is 171,491 bp long, and comprises a pair of 41,891 bp inverted repeats, a large-single-copy (LSC) region (85,028 bp), and a diminished small-single-copy region (2681 bp). The cp genome has 135 genes, including 89 that encode proteins, plus 38 tRNAs, and eight rRNAs. Five genes (rpl32, ndhF, accD, clpP, and ndhK) are pseudogenized or lost in its cpDNA. When compared with that of a related species, Aquilaria sinensis, its LSC region contains a large inversion event between rbcL and rps12 that caused pseudogenization of clpP and accD.

참고문헌 (12)

Korean J Plant Taxon IS Choi 43 1 12 2013 10.11110/kjpt.2013.43.1.12 Choi IS, Kim SY, Choi BH (2013) Taxonomic position and genetic differentiation of Korean Astragalus mongholicus Bunge. Korean J Plant Taxon 43(1):12-21. doi: 10.11110/kjpt.2013.43.1.12

원문보기 상세보기
Conserv Genet Resour IS Choi 6 4 1027 2014 10.1007/s12686-014-0277-6 Choi IS, Lee JH, Choi BH (2014) Isolation and characterization of 12 microsatellite loci from Maackia fauriei (Fabaceae), a large tree endemic to Jeju Island. Conserv Genet Resour 6(4):1027-1029. doi: 10.1007/s12686-014-0277-6

상세보기
Biochem Syst Ecol MY Chung 38 5 888 2010 10.1016/j.bse.2010.09.008 Chung MY, Nason JD, Sun BY, Moon MO, Chung JM, Park CW, Chung MG (2010) Extremely low levels of genetic variation in the critically endangered monotypic fern genus Mankyua chejuense (Ophioglossaceae) from Korea: implications for conservation. Biochem Syst Ecol 38(5):888-896

상세보기
Tree Genet Genomes D Fajardo 9 2 489 2013 10.1007/s11295-012-0573-9 Fajardo D et al (2013) Complete plastid genome sequence of Vaccinium macrocarpon: structure, gene content, and rearrangements revealed by next generation sequencing. Tree Genet Genomes 9(2):489-498. doi: 10.1007/s11295-012-0573-9

상세보기
J Species Res YS Jo 1 2 249 2012 10.12651/JSR.2012.1.2.249 Jo YS, Kim TW, Choi BJ, Oh HS (2012) Current status of terrestrial mammals on Jeju Island. J Species Res 1(2):249-256. doi: 10.12651/JSR.2012.1.2.249

원문보기 상세보기
Korea National Arboretum 100 2008 Rare plants data book in Korea Korea National Arboretum (2008) Rare plants data book in Korea. Korea National Arboretum, Pocheon, p 100
Korean J Plant Taxon JS Lee 43 2 94 2013 10.11110/kjpt.2013.43.2.94 Lee JS, Lee KH, So SK, Choi CH, Kim MY (2013) A new species of Daphne (Thymelaeaceae): D. jejudoensis M. Kim. Korean J Plant Taxon 43(2):94-98. doi: 10.11110/kjpt.2013.43.2.94

원문보기 상세보기
Plant Syst Evol JH Lee 300 8 1913 2014 10.1007/s00606-014-1017-9 Lee JH, Lee DH, Choi IS, Choi BH (2014) Genetic diversity and historical migration patterns of an endemic evergreen oak, Quercus acuta, across Korea and Japan, inferred from nuclear microsatellites. Plant Syst Evol 300(8):1913-1923. doi: 10.1007/s00606-014-1017-9

상세보기
Korean J Plant Taxon JH Lee 47 1 6 2017 10.11110/kjpt.2017.47.1.6 Lee JH, Cho WB, Yang SG, Han EK, Lyu ES, Kim WJ, Moon BC, Choi GY (2017) Development and characterization of 21 microsatellite markers in Daphne kiusiana, an evergreen broad-leaved shrub endemic to Korea and Japan. Korean J Plant Taxon 47(1):6-10. doi: 10.11110/kjpt.2017.47.1.6

원문보기 상세보기
Sci Rep CS Lin 5 9040 2015 10.1038/srep09040 Lin CS et al (2015) The location and translocation of ndh genes of chloroplast origin in the Orchidaceae family. Sci Rep 5:9040. doi: 10.1038/srep09040

상세보기
Nucleic Acids Res M Lohse 41 W575 2013 10.1093/nar/gkt289 Lohse M, Drechsel O, Kahlau S, Bock R (2013) OrganellarGenomeDRAW: a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets. Nucleic Acids Res 41:W575-W581. doi: 10.1093/nar/gkt289

상세보기
Bioinformatics SK Wyman 20 3252 2004 10.1093/bioinformatics/bth352 Wyman SK, Jansen RK, Boore JL (2004) Automatic annotation of organellar genomes with DOGMA. Bioinformatics 20:3252-3255. doi: 10.1093/bioinformatics/bth352

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The complete chloroplast genome of Daphne kiusiana, an evergreen broad-leaved shrub on Jeju Island

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The complete chloroplast genome of Daphne kiusiana, an evergreen broad-leaved shrub on Jeju Island

Abstract ▼ AI-Helper

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