$\require{mediawiki-texvc}$

연합인증

연합인증 가입 기관의 연구자들은 소속기관의 인증정보(ID와 암호)를 이용해 다른 대학, 연구기관, 서비스 공급자의 다양한 온라인 자원과 연구 데이터를 이용할 수 있습니다.

이는 여행자가 자국에서 발행 받은 여권으로 세계 각국을 자유롭게 여행할 수 있는 것과 같습니다.

연합인증으로 이용이 가능한 서비스는 NTIS, DataON, Edison, Kafe, Webinar 등이 있습니다.

한번의 인증절차만으로 연합인증 가입 서비스에 추가 로그인 없이 이용이 가능합니다.

다만, 연합인증을 위해서는 최초 1회만 인증 절차가 필요합니다. (회원이 아닐 경우 회원 가입이 필요합니다.)

연합인증 절차는 다음과 같습니다.

최초이용시에는
ScienceON에 로그인 → 연합인증 서비스 접속 → 로그인 (본인 확인 또는 회원가입) → 서비스 이용

그 이후에는
ScienceON 로그인 → 연합인증 서비스 접속 → 서비스 이용

연합인증을 활용하시면 KISTI가 제공하는 다양한 서비스를 편리하게 이용하실 수 있습니다.

Genome Constitution and Classification Using Retrotransposon­Based Markers in the Orphan Crop Banana

Journal of plant biology = 식물학회지, v.48 no.1, 2005년, pp.96 - 105  

Teo Chee How (Department of Biotechnology, Faculty of Food Science and Biotechnology, Universiti Putra Malaysia, Department of Biology, University of Leicester) ,  Tan Siang Hee (Molecular Biology Department, Sime Darby Technology, Centru Sdn Bhd) ,  Ho Chai Ling (Department of Biotechnology, Faculty of Food Science and Biotechnology, Universiti Putra Malaysia) ,  Faridah Qamaruz Zaman (Department of Biology, Faculty of Science and Environmental Studies, Universiti Putra Malaysia) ,  Othman Yasmin Rofina (Institute of Biological Sciences, Universiti Malaya) ,  Heslop-Harrison John Seymour (Department of Biology, University of Leicester) ,  Kalendar Ruslan (MTT) ,  Schulman Alan Howard (MTT)

Abstract ▼ AI-Helper 아이콘AI-Helper

We have exploited the repetitive and dispersed nature of many long terminal repeat (LTR)-retrotransposon families for characterizing genome constitutions and classifying cultivars of the genus Musa. Insertional polymorph isms of the elements were studied using seven published and two newly designed ...

참고문헌 (28)

  1. Mol Biol Evol A Baumel 19 1218 2002 10.1093/oxfordjournals.molbev.a004182 Baumel A, Ainouche M, Kalendar R, Schulman AH (2002) Inter-retrotransposon amplified polymorphism (IRAP), and retotransposon-microsatellite amplified polymorphism (REMAP) in populations of the young allopolyploid speciesSpartina angelica Hubbard (Poaceae). Mol Biol Evol 19: 1218-1227 

    상세보기 crossref

  2. Plant Mol Biol E Boyko 48 767 2002 10.1023/A:1014831511810 Boyko E, Kalendar R, Korzun V, Gill B, Schulman AH (2002) Combined mapping ofAegilops tauschii by ret-rotransposon, microsatellite, and gene markers. Plant Mol Biol 48: 767-790 

    상세보기 crossref

  3. Nucl Acids Res AJ Flavell 20 3639 1992 10.1093/nar/20.14.3639 Flavell AJ, Dunbar E, Anderson R, Pearce SR, Hartley R, Kumar A (1992)Tyl-copia group retrotransposons are ubiquitous and heterogeneous in higher plants. Nucl Acids Res 20: 3639-3644 

    상세보기 crossref

  4. Plant J AJ Flavell 16 643 1998 10.1046/j.1365-313x.1998.00334.x Flavell AJ, Knox MR, Pearce SR, Ellis THN (1998) Ret-rotransposon-based insertion polymorphisms (RBIP) for high throughput marker analysis. Plant J 16: 643-650 

    상세보기 crossref

  5. Nature M-A Grandbastien 337 376 1989 10.1038/337376a0 Grandbastien M-A, Spielmann A, Caboche M (1989)Tnt1, a mobile retroviral-like transposable element of tobacco isolated by plant cell genetics. Nature 337: 376-380 

    상세보기 crossref

  6. EMBO J H Hirochika 12 2521 1993 10.1002/j.1460-2075.1993.tb05907.x Hirochika H (1993) Activation of tobacco retrotransposons during tissue culture. EMBO J 12: 2521-2528 

    상세보기 crossref

  7. Proc Natl Acad Sci USA H Hirochika 93 7783 1996 10.1073/pnas.93.15.7783 Hirochika H, Sugimoto K, Otsuki Y, Tsugawa H, Kanda M (1996) Retrotransposons of rice involved in mutations induced by tissue culture. Proc Natl Acad Sci USA 93: 7783-7788 

    상세보기 crossref

  8. JP Horry 67 1997 10.1017/CBO9780511470851.007 Biodiversity in Trust Horry JP, Ortiz R, Arnaud E, Crouch JH, Ferris RSB, Jones DR, Mateo N, Picq C, Vuylsteke (1997) Banana and plantain.In D Fuccillo, L Sears, P Stapleton, eds, Biodiversity in Trust. (Conservation and Use of Plane Genetic Resources in CGIAR Centres), Cambridge University, London, pp 67-81 

    crossref

  9. Theor Appl Genet M Iwamoto 98 853 1999 10.1007/s001220051144 Iwamoto M, Nagashima H, Nagamine T, Higo T, Higo K (1999)p-SINE1-like intron of theCatA catalase homologs and phylogenetic relationships among AA-genomeOryza and related species. Theor Appl Genet 98: 853-861 

    상세보기 crossref

  10. Theor Appl Genet R Kalendar 98 704 1999 10.1007/s001220051124 Kalendar R, Grab T, Regina M, Suoniemi A, Schulman AH (1999) IRAP and REMAP: Two new retrotransposon-based DNA fingerprinting techniques. Theor Appl Genet 98: 704-711 

    상세보기 crossref

  11. Proc Natl Acad Sci USA R Kalendar 97 6603 2000 10.1073/pnas.110587497 Kalendar R, Tanskanen J, Immonen S, Nevo E, Schulman AH (2000) Genome evolution of wild barley (Hordeum spontaneum) byBARE-1 retrotransposon dynamics in response to sharp microclimatic divergence. Proc Natl Acad Sci USA 97: 6603-6607 

    상세보기 crossref

  12. Ann Rev Genet A Kumar 33 479 1999 10.1146/annurev.genet.33.1.479 Kumar A, Bennetzen J (1999) Plant retrotransposons. Ann Rev Genet 33: 479-532 

    상세보기 crossref

  13. Mol Gen Genet O Manninen 264 325 2000 10.1007/s004380000326 Manninen O, Kalendar R, Robinson J, Schulman AH (2000) Application ofBARE-1 retrotransposon markers to the mapping of a major resistance gene for net blotch in barley. Mol Gen Genet 264: 325-334 

    상세보기 crossref

  14. Nucl Acids Res H Nakayashiki 29 1278 2001 10.1093/nar/29.6.1278 Nakayashiki H, Ikeda K, Hashimota Y, Tosa Y, Mayama S (2001) Methylation is not the main force repressing the retrotransposon MAGGY inMagnaporthe grisea. Nucl Acids Res 29: 1278-1284 

    상세보기 crossref

  15. Mol Gen Genet SR Pearce 205 305 1996 Pearce SR, Harrison G, Li D, Heslop-Harrison JS, Kumar A, Flavell AJ (1996) TheTy1-copia group of retrotrans-posons inVicia species: Copy number, sequence heterogeneity and chromosomal localisation. Mol Gen Genet 205: 305-315 

  16. Mol Gen Genet SR Pearce 263 898 2000 10.1007/s004380000257 Pearce SR, Knox M, Ellis THN, Flavell AJ, Kumar A (2000) Pea Ty1-copia group retrotransposons: transpositional activity and use as markers to study genetic diversity inPisum. Mol Gen Genet 263: 898-907 

    상세보기 crossref

  17. Plant J SR Pearce 19 711 1999 10.1046/j.1365-313x.1999.00556.x Pearce SR, Stuart-Rogers C, Knox MR, Kumar A, Ellis THN, Flavell AJ (1999) Rapid isolation of plant Ty1-copia group retrotransposon LTR sequences for molecular marker studies. Plant J 19: 711-717 

    상세보기 crossref

  18. Mol Biol Evol N Saitou 4 406 1987 Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425 

    상세보기

  19. Science P SanMiguel 274 765 1996 10.1126/science.274.5288.765 SanMiguel P, Tikhonov A, Jin YK, Motchoulskaia N, Zakharov D, Melake-Berhan A, Springer PS, Edwards KJ, Lee M, Avramova Z, Bennetzen JL (1996) Nested retrotransposons in the intergenic regions of the maize genome. Science 274: 765-768 

    상세보기 crossref

  20. Nature M Shimamura 388 666 1997 10.1038/41759 Shimamura M, Yasue H, Ohshima K, Abe H, Kato H, Kishiro T, Goto M, Munechika I, Okada N (1997) Molecular evidence from retroposons that whales form a clade within even-toed ungulates. Nature 388: 666-670 

    상세보기 crossref

  21. Genome Res K Shirasu 10 908 2000 10.1101/gr.10.7.908 Shirasu K, Schulman AH, Lahaye T, Schulze-Lefert P (2000) A contiguous 66 kb barley DNA sequence provides evidence for reversible genome expansion. Genome Res 10: 908-915 

    상세보기 crossref

  22. P Stover 1987 Bananas Ed 3 Stover P, Simmonds NW (1987) Bananas, Ed 3. Longman, London 

  23. Mol Biol Evol C Tatout 16 1614 1999 10.1093/oxfordjournals.molbev.a026074 Tatout C, Warwick S, Lenoir A, Deragon JM (1999) Sine insertions as clade markers for wildCrucifer species. Mol Biol Evol 16: 1614-1621 

    crossref

  24. J Biochem Mol Biol Biophys CH Teo 6 193 2002 10.1080/10258140290022329 Teo CH, Tan SH, Othman YR, Schwarzacher T (2002) The cloning of Ty1-copia-like retrotransposons from 10 varieties of banana (Musa sp.). J Biochem Mol Biol Biophys 6: 193-201 

    상세보기 crossref

  25. Plant Physiol CM Vicient 125 1283 2001 10.1104/pp.125.3.1283 Vicient CM, Jaaskelainen M, Kalendar R, Schulman AH (2001) Active retrotransposons are a common feature of grass genomes. Plant Physiol 125: 1283-1292 

    상세보기 crossref

  26. Genome Lett CM Vicient 1 35 2002 10.1166/gl.2002.002 Vicient CM, Schulman AH (2002) Copia-like retrotransposons in the rice genome: few and assorted. Genome Lett 1: 35-47 

    crossref

  27. Proc Natl Acad Sci USA DF Voytas 89 7124 1992 10.1073/pnas.89.15.7124 Voytas DF, Cummings MP, Konieczny AK, Ausubel FM, Rodermel SR (1992) Copia-like retrotransposons are ubiquitous among plants. Proc Natl Acad Sci USA 89: 7124-7128 

    상세보기 crossref

  28. Mol Gen Genet R Waugh 253 687 1997 10.1007/s004380050372 Waugh R, McLean K, Flavell AJ, Pearce SR, Kumar A, Thomas BBT, Powell W (1997) Genetic distribution ofBARE-1-like retrotransposable elements in the barley genome revealed by sequence-specific amplification polymorphisms (S-SAP). Mol Gen Genet 253: 687-694 

    상세보기 crossref

관련 콘텐츠

섹션별 컨텐츠 바로가기

AI-Helper ※ AI-Helper는 오픈소스 모델을 사용합니다.

AI-Helper 아이콘
AI-Helper
안녕하세요, AI-Helper입니다. 좌측 "선택된 텍스트"에서 텍스트를 선택하여 요약, 번역, 용어설명을 실행하세요.
※ AI-Helper는 부적절한 답변을 할 수 있습니다.

선택된 텍스트

맨위로