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Identification of Differentially Regulated Genes in the Brain of Limanda yokohamae from Masan Bay, Korea 원문보기

환경생물 = Korean journal of environmental biology, v.27 no.1, 2009년, pp.95 - 99  

Oh, Jeong-Hwan (Department of Biological Sciences, Pusan National University) ,  Moon, Hyo-Bang (Marine Environment Research Team, National Fisheries Research and Development Institute) ,  Choe, Eun-Sang (Department of Biological Sciences, Pusan National University)

Abstract AI-Helper 아이콘AI-Helper

Transcriptomic changes in the brain of Limanda yokohamae were investigated to understand the environmental condition of Masan Bay, Korea. Differentially expressed genes (DEGs) in the brain of the flat fish from Masan Bay were identified by comparing those from the reference site Gangneung using anne...

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제안 방법

  • 2004). In this study, mRNA expression profiles from Masan Bay were compared with the reference site Gang- neung using the ACP-based PCR with 9 arbitrary primers. As shown in Fig.
  • The status of environmental contamination of Masan Bay was determined by identifying DEGs in the brain of L. yokohamae as compared with those of Gangneung, Korea, using ACP-based PCR. Recently, the "omics" approach such as transcriptomics has been used to aid the risk assessment of pollutants and to assess the biological effect of toxicants on living organisms, which can offer an opportunity to identify a potential biomarker and gain a more comprehensive assessment (Waring et al.

이론/모형

  • DEGs were screened by ACP-based PCR method (Kim et al. 2004) using the GeneFishing™DEG kits (Seegene, Korea). Briefly, the second-strand cDNA synthesis was conducted at 50℃ during one cycle of the first-stage PCR in a final reaction volume of 20 μL containing 3 ~ 5 μL (about 50 ng) of diluted first-strand cDNA, 1 μL of dT-ACP2 (10 |1M), 1 μL of 10 μM arbitrary ACP, and 10 |1L of 2 x Master Mix (Seegene).
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참고문헌 (32)

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