$\require{mediawiki-texvc}$

연합인증

연합인증 가입 기관의 연구자들은 소속기관의 인증정보(ID와 암호)를 이용해 다른 대학, 연구기관, 서비스 공급자의 다양한 온라인 자원과 연구 데이터를 이용할 수 있습니다.

이는 여행자가 자국에서 발행 받은 여권으로 세계 각국을 자유롭게 여행할 수 있는 것과 같습니다.

연합인증으로 이용이 가능한 서비스는 NTIS, DataON, Edison, Kafe, Webinar 등이 있습니다.

한번의 인증절차만으로 연합인증 가입 서비스에 추가 로그인 없이 이용이 가능합니다.

다만, 연합인증을 위해서는 최초 1회만 인증 절차가 필요합니다. (회원이 아닐 경우 회원 가입이 필요합니다.)

연합인증 절차는 다음과 같습니다.

최초이용시에는
ScienceON에 로그인 → 연합인증 서비스 접속 → 로그인 (본인 확인 또는 회원가입) → 서비스 이용

그 이후에는
ScienceON 로그인 → 연합인증 서비스 접속 → 서비스 이용

연합인증을 활용하시면 KISTI가 제공하는 다양한 서비스를 편리하게 이용하실 수 있습니다.

[해외논문] Global structure and mechanical properties of a 10-bp nucleosome positioning motif 원문보기

Proceedings of the National Academy of Sciences of the United States of America, v.97 no.25, 2000년, pp.13608 - 13613  

Roychoudhury, M. (Department of Chemistry, P.O. Box 208107, Yale University, New Haven, CT 06520) ,  Sitlani, A. (Department of Chemistry, P.O. Box 208107, Yale University, New Haven, CT 06520) ,  Lapham, J. (Department of Chemistry, P.O. Box 208107, Yale University, New Haven, CT 06520) ,  Crothers, D. M. (Department of Chemistry, P.O. Box 208107, Yale University, New Haven, CT 06520)

Abstract AI-Helper 아이콘AI-Helper

The method of DNA cyclization kinetics reveals special properties of the TATAAACGCC sequence motif found in DNA sequences that have high affinity for core histones. Replacement of 30 bp of generic DNA by three 10-bp repeats of the motif in small cyclization constructs increases cyclization rates by ...

참고문헌 (37)

  1. Luger, Karolin, Mäder, Armin W., Richmond, Robin K., Sargent, David F., Richmond, Timothy J.. Crystal structure of the nucleosome core particle at 2.8 Å resolution. Nature, vol.389, no.6648, 251-260.

  2. Wu, Hen-Ming, Crothers, Donald M.. The locus of sequence-directed and protein-induced DNA bending. Nature, vol.308, no.5959, 509-513.

  3. Hogan, M. E., Austin, R. H.. Importance of DNA stiffness in protein-DNA binding specificity. Nature, vol.329, no.6136, 263-266.

  4. Harpst, J.A.. Analysis of low angle light scattering results from T7 DNA. Biophysical chemistry, vol.11, no.2, 295-302.

  5. Hagerman, Paul J.. Investigation of the flexibility of DNA using transient electric birefringence. Biopolymers, vol.20, no.7, 1503-1535.

  6. Shore, D, Langowski, J, Baldwin, R L. DNA flexibility studied by covalent closure of short fragments into circles.. Proceedings of the National Academy of Sciences of the United States of America, vol.78, no.8, 4833-4837.

  7. Trifonov, Edward N.. Curved DN. Critical reviews in biochemistry, vol.19, no.2, 89-106.

  8. Levene, Stephen D., Wu, Hen Ming, Crothers, Donald M.. Bending and flexibility of kinetoplast DNA. Biochemistry, vol.25, no.14, 3988-3995.

  9. Bolshoy, A, McNamara, P, Harrington, R E, Trifonov, E N. Curved DNA without A-A: experimental estimation of all 16 DNA wedge angles.. Proceedings of the National Academy of Sciences of the United States of America, vol.88, no.6, 2312-2316.

  10. De Santis, Pasquale, Palleschi, Antonio, Savino, Maria, Scipioni, Anita. Validity of the nearest-neighbor approximation in the evaluation of the electrophoretic manifestations of DNA curvature. Biochemistry, vol.29, no.39, 9269-9273.

  11. Gorin, A.A., Zhurkin, V.B., Wilma K.. B-DNA Twisting Correlates with Base-pair Morphology. Journal of molecular biology, vol.247, no.1, 34-48.

  12. Olson, Wilma K., Babcock, Marla S., Gorin, Andrey, Liu, Guohua, Marky, Nancy L., Martino, Jennifer A., Pedersen, Scott C., Srinivasan, A.R., Tobias, Irwin, Westcott, Timothy P., Zhang, Peisen. Flexing and folding double helical DNA. Biophysical chemistry, vol.55, no.1, 7-29.

  13. Packer, Martin J., Dauncey, Mark P., Hunter, Christopher A.. Sequence-dependent DNA structure: dinucleotide conformational maps. Journal of molecular biology, vol.295, no.1, 71-83.

  14. Packer, Martin J, Dauncey, Mark P, Hunter, Christopher A. Sequence-dependent DNA structure: tetranucleotide conformational maps. Journal of molecular biology, vol.295, no.1, 85-103.

  15. Crothers, Donald M.. DNA curvature and deformation in protein-DNA complexes: A step in the right direction. Proceedings of the National Academy of Sciences of the United States of America, vol.95, no.26, 15163-15165.

  16. 10.1093/nar/11.6.1919 

  17. Anselmi, C., Bocchinfuso, G., De Santis, P., Savino, M., Scipioni, A.. Dual role of DNA intrinsic curvature and flexibility in determining nucleosome stability. Journal of molecular biology, vol.286, no.5, 1293-1301.

  18. Shore, David, Baldwin, Robert L.. Energetics of DNA twisting. Journal of molecular biology, vol.170, no.4, 957-981.

  19. Fujimoto, Bryant S., Schurr, J. Michael. Dependence of the torsional rigidity of DNA on base composition. Nature, vol.344, no.6262, 175-178.

  20. Wada-Kiyama, Yuko, Kuwabara, Kentaro, Sakuma, Yasuo, Onishi, Yoshiaki, Trifonov, Edward N, Kiyama, Ryoiti. Localization of curved DNA and its association with nucleosome phasing in the promoter region of the human estrogen receptor α gene. FEBS letters, vol.444, no.1, 117-124.

  21. Ozoline, O. N., Deev, A. A., Trifonov, E. N.. DNA Bendability-;A Novel Feature inE. coliPromoter Recognition. Journal of biomolecular structure & dynamics, vol.16, no.4, 825-831.

  22. Pedersen, A.G., Jensen, L.J., Brunak, S., Staerfeldt, H.H., Ussery, D.W.. A DNA structural atlas for Escherichia coli. Journal of molecular biology, vol.299, no.4, 907-930.

  23. 10.1016/0076-6879(92)12003-9 

  24. Kahn, J D, Crothers, D M. Protein-induced bending and DNA cyclization.. Proceedings of the National Academy of Sciences of the United States of America, vol.89, no.14, 6343-6347.

  25. 10.1038/368163a0 Kahn J. D. Yun E. & Crothers D. M. (1994) (1994) Nature (London) 368 163-166. 

  26. Sitlani, A, Crothers, D M. Fos and Jun do not bend the AP-1 recognition site.. Proceedings of the National Academy of Sciences of the United States of America, vol.93, no.8, 3248-3252.

  27. Hockings, Susan C., Kahn, Jason D., Crothers, Donald M.. Characterization of the ATF/CREB site and its complex with GCN4. Proceedings of the National Academy of Sciences of the United States of America, vol.95, no.4, 1410-1415.

  28. Sitlani, Ayesha, Crothers, Donald M.. DNA-binding domains of Fos and Jun do not induce DNA curvature: An investigation with solution and gel methods. Proceedings of the National Academy of Sciences of the United States of America, vol.95, no.4, 1404-1409.

  29. Davis, Natalie A., Majee, Sangita S., Kahn, Jason D.. TATA Box DNA Deformation with and without the TATA Box-binding Protein. Journal of molecular biology, vol.291, no.2, 249-265.

  30. Widlund, H.R., Cao, H., Simonsson, S., Magnusson, E., Simonsson, T., Nielsen, P.E., Kahn, J.D., Crothers, D.M., Kubista, M.. Identification and characterization of genomic nucleosome-positioning sequences. Journal of molecular biology, vol.267, no.4, 807-817.

  31. Ph.D. thesis Roychoudhury M 2000 M Roychoudhury Ph.D. thesis (Yale Univ., New Haven, CT, 2000). 

  32. Taylor, William H., Hagerman, Paul J.. Application of the method of phage T4 DNA ligase-catalyzed ring-closure to the study of DNA structure. Journal of molecular biology, vol.212, no.2, 363-376.

  33. Levene, Stephen D., Crothers, Donald M.. A Computer Graphics Study of Sequence-Directed Bending in DNA. Journal of biomolecular structure & dynamics, vol.1, no.2, 429-435.

  34. Koo, Hyeon Sook, Drak, Jacqueline, Rice, Janet A., Crothers, Donald M.. Determination of the extent of DNA bending by an adenine-thymine tract. Biochemistry, vol.29, no.17, 4227-4234.

  35. Olson, Wilma K, Zhurkin, Victor B. Modeling DNA deformations. Current opinion in structural biology, vol.10, no.3, 286-297.

  36. Kahn, J.D., Crothers, D.M.. Measurement of the DNA bend angle induced by the catabolite activator protein using Monte Carlo simulation of cyclization kinetics. Journal of molecular biology, vol.276, no.1, 287-309.

  37. Widlund, Hans R., Kuduvalli, Prasad N., Bengtsson, Martin, Cao, Hui, Tullius, Thomas D., Kubista, Mikael. Nucleosome Structural Features and Intrinsic Properties of the TATAAACGCC Repeat Sequence. The Journal of biological chemistry, vol.274, no.45, 31847-31852.

활용도 분석정보

상세보기
다운로드
내보내기

활용도 Top5 논문

해당 논문의 주제분야에서 활용도가 높은 상위 5개 콘텐츠를 보여줍니다.
더보기 버튼을 클릭하시면 더 많은 관련자료를 살펴볼 수 있습니다.

관련 콘텐츠

오픈액세스(OA) 유형

BRONZE

출판사/학술단체 등이 한시적으로 특별한 프로모션 또는 일정기간 경과 후 접근을 허용하여, 출판사/학술단체 등의 사이트에서 이용 가능한 논문

저작권 관리 안내
섹션별 컨텐츠 바로가기

AI-Helper ※ AI-Helper는 오픈소스 모델을 사용합니다.

AI-Helper 아이콘
AI-Helper
안녕하세요, AI-Helper입니다. 좌측 "선택된 텍스트"에서 텍스트를 선택하여 요약, 번역, 용어설명을 실행하세요.
※ AI-Helper는 부적절한 답변을 할 수 있습니다.

선택된 텍스트

맨위로