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Screening for novel bioactivities 원문보기

IPC분류정보
국가/구분 United States(US) Patent 등록
국제특허분류(IPC7판)
  • C12Q-001/68
  • C12P-019/34
  • C07H-021/02
  • C07H-021/04
출원번호 US-0918406 (1997-08-26)
발명자 / 주소
  • Short Jay M.
출원인 / 주소
  • Diversa Corporation
대리인 / 주소
    Gray Cary Ware & Freidenrich LLPHaile
인용정보 피인용 횟수 : 124  인용 특허 : 3

초록

Disclosed is a process for identifying clones having a specified activity of interest, which process comprises (i) generating one or more expression libraries derived from nucleic acid directly isolated from the environment; and (ii) screening said libraries utilizing an assay system. More particula

대표청구항

[ What is claimed is:] [1.] A method for identifying a desired activity encoded by a genomic DNA population comprising:(a) obtaining a single-stranded genomic DNA population;(b) contacting the single-stranded DNA population of (a) with a DNA probe bound to a ligand under conditions and for sufficien

이 특허에 인용된 특허 (3)

  1. Peterson Todd C. ; Foster Lyndon M. ; Brian Paul, Methods for generating and screening novel metabolic pathways.
  2. Thompson Katie A. ; Foster Lyndon M. ; Peterson Todd C. ; Nasby Nicole Marie ; Brian Paul, Methods for generating and screening novel metabolic pathways.
  3. Stemmer Willem P. C. (Los Gatos CA), Methods for in vitro recombination.

이 특허를 인용한 특허 (124)

  1. Punnonen, Juha; Bass, Steven H.; Whalen, Robert Gerald; Howard, Russell; Stemmer, Willem P. C., Antigen library immunization.
  2. Emalfarb, Mark A.; Gusakov, Alexander Vasilievich; Punt, Peter J.; Verdoes, Jan Cornelis; Sinitsyn, Arkady Panteleimonovich; Vlasenko, Elena; Hinz, Sandra Wihelmina Agnes; Gosink, Mark; Jiang, Zhijie; Van der Meij, Jacoba, BX11 enzymes having xylosidase activity.
  3. Punnonen,Juha; Wright,Anne; Semyonov,Andrey, Chimeric promoters.
  4. Punnonen, Juha; Lazetic, Alexandra L. L.; Leong, Steven R.; Chang, Jean Chia Chun, Co-stimulatory polypeptides.
  5. Punnonen,Juha; Lazetic,Alexandra L. L.; Leong,Steven R.; Chang,Chia Chun, Co-stimulatory polypeptides.
  6. Short,Jay M., Combinatorial screening of mixed populations of organisms.
  7. Goldsmith, Neil; Sorensen, Alexandra M. P. Santana; Nielsen, Soren V. S.; Naesby, Michael, Concatemers of differentially expressed multiple genes.
  8. Gusakov, Alexander V.; Salanovich, Tatyana N.; Antonov, Alexey I.; Ustinov, Boris B.; Okunev, Oleg N.; Burlingame, Richard P.; Emalfarb, Mark A.; Baez, Marco A.; Sinitsyn, Arkady P., Construction of Highly efficient cellulase compositions for enzymatic hydrolysis of cellulose.
  9. Gusakov, Alexander V.; Salanovich, Tatyana N.; Antonov, Alexey I.; Ustinov, Boris B.; Okunev, Oleg N.; Burlingame, Richard P.; Emalfarb, Mark A.; Baez, Marco A.; Sinitsyn, Arkady P., Construction of highly efficient cellulase compositions for enzymatic hydrolysis of cellulose.
  10. Leong,Steven R.; Punnonen,Juha, Cytokine polypeptides.
  11. Short, Jay M., Directed evolution of thermophilic enzymes.
  12. Jay M. Short ; Gerhard Johann Frey, End selection in directed evolution.
  13. Short, Jay M.; Frey, Gerhard Johann, End selection in directed evolution.
  14. Short, Jay M.; Frey, Gerhard Johann, End selection in directed evolution.
  15. Short, Jay M.; Frey, Gerhard Johann, End selection in directed evolution.
  16. Willem P. C. Stemmer, Enhancing cell competence by recursive sequence recombination.
  17. Willem P. C. Stemmer, Enhancing transfection efficiency of vectors by recursive recombination.
  18. Zhao, Lishan; Mathur, Eric J.; Weiner, David; Richardson, Toby; Milan, Aileen; Burk, Mark J.; Han, Bin; Short, Jay M., Epoxide hydrolases, nucleic acids encoding them and methods for making and using them.
  19. DelCardayre, Stephen; Tobin, Matthew B.; Stemmer, Willem P. C.; Ness, Jon E.; Minshull, Jeremy S.; Patten, Phillip A.; Subramanian, Venkiteswatan Mani; Castle, Linda A.; Krebber, Claus M.; Bass, Steven H.; Zhang, Ying-Xin; Cox, Anthony R.; Huisman, Gjalt W.; Yuan, Ling; Affholter, Joseph A., Evolution of whole cells and organisms by recursive sequence recombination.
  20. DelCardayre, Stephen; Tobin, Matthew B.; Stemmer, Willem P. C.; Ness, Jon E.; Minshull, Jeremy S.; Patten, Phillip A.; Subramanian, Venkiteswatan Mani; Castle, Linda A.; Krebber, Claus M.; Bass, Steven H.; Zhang, Ying-Xin; Cox, Anthony R.; Huisman, Gjalt W.; Yuan, Ling; Affholter, Joseph A., Evolution of whole cells and organisms by recursive sequence recombination.
  21. Stephen del Cardayre ; Matthew Tobin ; Willem P. C. Stemmer ; Jeremy Minshull, Evolution of whole cells and organisms by recursive sequence recombination.
  22. Stephen delCardayre ; Matthew Tobin, Evolution of whole cells and organisms by recursive sequence recombination.
  23. Stephen delCardayre ; Matthew Tobin ; William P. C. Stemmer ; Jon E. Ness ; Jeremy Minshull ; Phillip Patten ; Venkiteswatan Subramanian ; Linda Castle ; Claus M. Krebber ; Steve Bass, Evolution of whole cells and organisms by recursive sequence recombination.
  24. Tobin Matthew ; Stemmer William P. C. ; Ness Jon E. ; Minshull Jeremy, Evolution of whole cells and organisms by recursive sequence recombination.
  25. delCardayre Stephen ; Tobin Matthew ; Stemmer William P. C. ; Ness Jon E. ; Minshull Jeremy ; Patten Phillip ; Subramanian Venkiteswatan ; Castle Linda ; Bass Steve, Evolution of whole cells and organisms by recursive sequence recombination.
  26. delCardayre, Stephen; Tobin, Matthew B.; Stemmer, Willem P. C.; Ness, Jon E.; Minshull, Jeremy S.; Patten, Phillip A.; Subramanian, Venkiteswatan Mani; Castle, Linda A.; Krebber, Claus M.; Bass, Steven H.; Zhang, Ying Xin; Cox, Anthony R.; Huisman, Gjalt W.; Yuan, Ling; Affholter, Joseph A., Evolution of whole cells and organisms by recursive sequence recombination.
  27. delCardayre, Stephen; Tobin, Matthew; Stemmer, William P. C.; Ness, Jon E.; Minshull, Jeremy; Patten, Phillip, Evolution of whole cells and organisms by recursive sequence recombination.
  28. delCardayre, Stephen; Tobin, Matthew; Stemmer, William P. C.; Ness, Jon E.; Minshull, Jeremy; Patten, Phillip; Subramanian, Venkiteswaran; Castle, Linda; Krebber, Claus M.; Bass, Steve, Evolution of whole cells and organisms by recursive sequence recombination.
  29. delCardayre,Stephen; Tobin,Matthew; Stemmer,Willem P. C.; Ness,Jon E.; Minshull,Jeremy; Patten,Phillip; Subramanian,Venkiteswatan; Castle,Linda A.; Krebber,Claus M.; Bass,Steve; Zhang,Ying Xin; Cox,T, Evolution of whole cells and organisms by recursive sequence recombination.
  30. Willem P. C. Stemmer, Evolving conjugative transfer of DNA by recursive recombination.
  31. Willem P. C. Stemmer, Evolving susceptibility of cellular receptors to viral infection by recursive recombination.
  32. Jay M. Short ; Gerhard J. Frey ; Tsotne D. Djavakhishvili, Exonucease-mediated gene assembly in directed evolution.
  33. Short, Jay M., Exonuclease-mediated gene assembly in directed evolution.
  34. Jay M. Short ; Tsotne David Djavakhishvili ; Gerhard Johann Frey, Exonuclease-mediated nucleic acid reassembly in directed evolution.
  35. Short, Jay M., Exonuclease-mediated nucleic acid reassembly in directed evolution.
  36. Short, Jay M.; Djavakhishvili, Tsotne David; Frey, Gerhard Johann, Exonuclease-mediated nucleic acid reassembly in directed evolution.
  37. Emalfarb, Mark A.; Punt, Peter J.; Van Zeijl, Cornelia; Van Den Hondel, Cornelius; Verdoes, Jan; Burlingame, Richard P., Expression and high-throughput screening of complex expressed DNA libraries in filamentous fungi.
  38. Emalfarb, Mark A.; Punt, Peter J.; Van Zeijl, Cornelia; Van den Hondel, Cornelius; Verdoes, Jan Cornelis; Burlingame, Richard P., Expression and high-throughput screening of complex expressed DNA libraries in filamentous fungi.
  39. Punnonen, Juha; Bass, Steven H.; Whalen, Robert Gerald; Howard, Russell; Stemmer, Willem P. C., Flavivirus and alphavirus recombinant antigen libraries.
  40. Vega, Manuel; Drittanti, Lila, High throughput directed evolution by rational mutagenesis.
  41. Short, Jay M.; Keller, Martin, High throughput screening for novel Bioactivities.
  42. Short, Jay M.; Keller, Martin, High throughput screening of mycelia for bioactivities or biomolecules.
  43. Emalfarb, Mark A.; Punt, Peter J.; van Zeijl, Cornelia; van den Hondel, Cornelius, High-throughput screening of expressed DNA libraries in filamentous fungi.
  44. Emalfarb,Mark A.; Punt,Peter J.; van Zeijl,Cornelia; van den Hondel,Cornelius, High-throughput screening of expressed DNA libraries in filamentous fungi.
  45. Bass,Steven H.; Davis,S. Christopher; Patten,Phillip A.; Tobin,Matthew; Minshull,Jeremy; Welch,Mark; Gustafsson,Claes; Carr,Brian; Jenne,Stephane; Raillard,Sun Ai; Crameri,Andreas; Stemmer,Willem P. C.; Emig,Robin; Longchamp,Pascal; Goldman,Stanley; Giver,Lorraine J.; Affholter,Joseph A., Integrated system for diversity generation and screening.
  46. Bass, Steven H.; Davis, Simon Christopher; Patten, Phillip A.; Tobin, Matthew; Minshull, Jeremy S.; Welch, Mark; Gustafsson, Claus; Carr, Brian; Jenne, Stephan J.; Raillard, Sun Ai; Crameri, Andreas; Stemmer, Willem P. C.; Emig, Robin; Longchamp, Pascal; Goldman, Stanley; Giver, Lorraine J.; Affholter, Joseph A., Integrated systems and methods for diversity generation and screening.
  47. Gantier, Rene; Vega, Manuel; Drittanti, Lila; Guyon, Thierry, Interferon-β mutants with increased anti-proliferative activity.
  48. Quaiser, Achim; Ochsenreiter, Torsten; Treusch, Alexander H.; Kletzin, Arnulf; Schleper, Christa; Lorenz, Patrick; Eck, Jürgen, Isolation and cloning of DNA from uncultivated organisms.
  49. Goldsmith, Neil; Sørensen, Alexandra M. P. Santana; Nielsen, Søren V. S., Library of a collection of cells.
  50. Giver, Lorraine J.; Minshull, Jeremy; Vogel, Kurt, Lipase genes.
  51. Giver,Lorraine J.; Minshull,Jeremy; Vogel,Kurt, Lipase genes.
  52. James Hoch ; Veronique Dartois, Metabolic selection methods.
  53. Arnold, Frances; Shao, Zhixin; Volkov, Alexander, Method for creating polynucleotide and polypeptide sequences.
  54. Arnold, Frances; Shao, Zhixin; Volkov, Alexander, Method for creating polynucleotide and polypeptide sequences.
  55. Arnold,Frances; Shao,Zhixin; Volkov,Alexander, Method for creating polynucleotide and polypeptide sequences.
  56. Padgett, Hal S.; Lindbo, John A.; Fitzmaurice, Wayne P., Method of increasing complementarity in a heteroduplex.
  57. Padgett, Hal S.; Lindbo, John A.; Fitzmaurice, Wayne P.; Vaewhongs, Andrew A., Method of increasing complementarity in a heteroduplex.
  58. Padgett,Hal S.; Lindbo,John A.; Fitzmaurice,Wayne P., Method of increasing complementarity in a heteroduplex.
  59. Padgett,Hal S.; Lindbo,John A.; Fitzmaurice,Wayne P., Method of increasing complementarity in a heteroduplex.
  60. Menzel,Rolf, Methods and compositions for directed gene assembly.
  61. Patten Phillip A. ; Stemmer Willem P. C., Methods and compositions for polypeptide engineering.
  62. Patten, Phillip A.; Stemmer, Willem P. C., Methods and compositions for polypeptide engineering.
  63. Patten, Phillip A.; Stemmer, Willem P. C., Methods and compositions for polypeptide engineering.
  64. Patten, Phillip A.; Stemmer, Willem P. C., Methods and compositions for polypeptide engineering.
  65. Patten, Phillip A.; Stemmer, Willem P. C., Methods and compositions for polypeptide engineering.
  66. Patten, Phillip A.; Stemmer, Willem P. C., Methods and compositions for polypeptide engineering.
  67. Patten, Phillip A.; Stemmer, Willem P. C., Methods and compositions for polypeptide engineering.
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  72. Stemmer Willem P. C., Methods for generating polynucleotides having desired characteristics by iterative selection and recombination.
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  81. Stemmer, Willem P. C.; Crameri, Andreas, Methods for generating polynucleotides having desired characteristics by iterative selection and recombination.
  82. Stemmer, Willem P. C.; Crameri, Andreas, Methods for generating polynucleotides having desired characteristics by iterative selection and recombination.
  83. Stemmer,Willem P. C., Methods for generating polynucleotides having desired characteristics by iterative selection and recombination.
  84. Stemmer,Willem P. C.; Crameri,Andreas, Methods for generating polynucleotides having desired characteristics by iterative selection and recombination.
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  88. Willem P. C. Stemmer ; Andreas M. Cramieri, Methods for generating polynucleotides having desired characteristics by iterative selection and recombination.
  89. Stemmer, Willem P. C., Methods for producing recombined antibodies.
  90. Willem P.C. Stemmer, Methods for recombining nucleic acids.
  91. Willem P. C. Stemmer, Methods of evolving a polynucleotides by mutagenesis and recombination.
  92. Torben Vedel Borchert DK; Titus Kretzschmar DE; Joel R. Cherry ; Vind Jesper DK, Methods of producing polynucleotide variants.
  93. Handelsman,Jo; Goodman,Robert M.; Rondon,Michelle R., Microorganism genomics, compositions and methods related thereto.
  94. Padgett,Hal S.; Vaewhongs,Andrew A.; Vojdani,Fakhrieh S.; Smith,Mark L.; Lindbo,John A.; Fitzmaurice,Wayne P., Mismatch endonucleases and methods of use.
  95. Stemmer, Willem P. C.; Patten, Phillip; Soong, Nay Wei, Modification of virus tropism and host range by viral genome shuffling.
  96. Short, Jay M., Non-stochastic generation of genetic vaccines and enzymes.
  97. Jarrell, Kevin A.; Coljee, Vincent W.; Donahue, William; Mikheeva, Svetlana, Nucleic acid cloning.
  98. Stemmer, Willem P. C., Nucleic acid libraries.
  99. Padgett,Hal S.; Vaewhongs,Andrew A., Nucleic acid molecules encoding endonucleases and methods of use thereof.
  100. Padgett,Hal S.; Vaewhongs,Andrew A., Nucleic acid molecules encoding endonucleases and methods of use thereof.
  101. Terlesky,Kathy; Earle,Chris, Nucleic acid-binding polymers.
  102. Punnonen,Juha; Stemmer,Willem P. C.; Whalen,Robert Gerald; Howard,Russell J., Optimization of immunomodulatory properties of genetic vaccines.
  103. Willem P. C. Stemmer ; Linda A. Castle ; Takashi Yamamoto, Optimization of pest resistance genes using DNA shuffling.
  104. Punnonen, Juha; Bass, Steven H.; Whalen, Robert Gerald; Howard, Russell; Stemmer, Willem P. C., Polynucleotides encoding flavivirus and alphavirus multivalent antigenic polypeptides.
  105. Padgett, Hal S.; Lindbo, John A.; Fitzmaurice, Wayne P., Population of polynucleotide sequence variants.
  106. Gantier, Rene; Vega, Manuel; Drittanti, Lila; Guyon, Thierry, Protease resistant interferon beta mutants.
  107. Gantier, Rene; Vega, Manuel; Drittanti, Lila; Guyon, Thierry, Protease resistant modified IFN beta polypeptides and their use in treating diseases.
  108. Gantier, Rene; Vega, Manuel; Drittanti, Lila; Guyon, Thierry, Protease resistant modified erythropoietin polypeptides.
  109. Gantier, Rene; Vega, Manuel; Drittanti, Lila; Guyon, Thierry, Protease resistant modified interferon alpha polypeptides.
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  111. Gantier, Rene; Vega, Manuel; Drittanti, Lila; Guyon, Thierry, Rational evolution of cytokines for higher stability, the cytokines and encoding nucleic acid molecules.
  112. Phillip A. Patten ; Volker Heinrichs ; Willem P. C. Stemmer, Recombination of insertion modified nucleic acids.
  113. Phillip A. Patten ; Volker Heinrichs ; Willem P. C. Stemmer, Recombination of insertion modified nucleic acids.
  114. Phillip A. Patten ; Volker Heinrichs ; Willem P. C. Stemmer, Recombination of insertion modified nucleic acids.
  115. Phillip A. Patten ; Volker Heinrichs ; Willem P. C. Stemmer, Recombination of insertion modified nucleic acids.
  116. Short, Jay M., Screening for novel bioactivities.
  117. Stemmer, Willem P. C., Shuffling polynucleotides by incomplete extension.
  118. Empedocles, Stephen; Watson, Andrew; Jin, Jian, Spatial positioning of spectrally labeled beads.
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  121. Empedocles, Stephen; Watson, Andrew; Jin, Jian, Spatial positioning of spectrally labeled beads.
  122. Short, Jay M., Synthetic ligation reassembly in directed evolution.
  123. Jarrell, Kevin; Turczyk, Brian, System for manipulating nucleic acids.
  124. Emalfarb, Mark Aaron; Burlingame, Richard Paul; Olson, Philip Terry; Sinitsyn, Arkady Panteleimonovich; Parriche, Martine; Bousson, Jean Christophe; Pynnonen, Christine Marie; Punt, Peter Jan; Van Zeijl, Cornelia Maria Johanna, Transformation system in the field of filamentous fungal hosts.
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