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Enhanced In Vitro Protein Synthesis Through Optimal Design of PCR Primers 원문보기

Journal of microbiology and biotechnology, v.16 no.3, 2006년, pp.355 - 359  

Ahn Jin-Ho (Interdisciplinary Program for Biochemical Engineering and Biotechnology, College of Engineering, Seoul National University) ,  Son Jeong-Mi (School of Chemical and Biological Engineering, College of Engineering, Seoul National University) ,  Hwang Mi-Yeon (School of Chemical and Biological Engineering, College of Engineering, Seoul National University) ,  Kim Tae-Wan (School of Chemical and Biological Engineering, College of Engineering, Seoul National University) ,  Park Chang-Kil (Department of Fine Chemical Engineering and Chemistry, Chungnam National University) ,  Choi Cha-Yong (Interdisciplinary Program for Biochemical Engineering and Biotechnology, College of Engineering, Seoul National University, School of Chemical and Biological Engineering, College of Engineering, Seoul National University) ,  Kim Dong-Myung (Department of Fine Chemical Engineering and Chemistry, Chungnam National University)

Abstract AI-Helper 아이콘AI-Helper

The functional stability of mRNA is one of the crucial factors affecting the efficiency of in vitro translation. As the rapid degradation of mRNA in the cell extract (S30 extract) causes early termination of the translational reactions, extending the mRNA half-life will improve the productivity of t...

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대상 데이터

  • The amount of each PCR product was determined using a spectrophotometer and agarose gel electrophoresis [5, 9]. All the mRNAs used in this study were prepared using a commercial in vitro transcription kit from Promega (Madison, WI, U.S.A.). The secondary structure of the transcribed mRNA was predicted using RNAdraw (vl.

이론/모형

  • The enzymatic activity of the synthesized chloramphenic이 acetyltransferase (CAT) was determined by the spectrophotometric procedures described by Shaw [15]. After dil니ting a sample 1,000-fold with water, 2 μ 1 of the diluted sample was added to a 96-well plate containing 178 μ 1 of a prewarmed assay mixture (100 mM Tris-CI, pH 7.
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참고문헌 (19)

  1. Betton, J. M. 2004. High throughput cloning and expression strategies for protein production. Biochimie 86: 601-605 

  2. Braun, P. and J. LaBaer. 2003. High throughput protein production for functional proteomics. Trends Biotechnol. 21: 383-388 

  3. Davanloo, P., A. H. Rosenberg, J. J. Dunn, and F. W. Studier. 1984. Cloning and expression of the gene for bacteriophage T7 RNA polymerase. Proc. Natl. Acad. Sci. USA 81: 2035- 2039 

  4. DiTursi, M. K. W., J. H. Chung, M. R. Newman, and J. S. Dordick. 2004. Simultaneous in vitro protein synthesis using solid-phase DNA template. Biotechnol. Prog. 20: 1705- 1709 

  5. Heo, M. S., J. H. Kim, S. H. Park, G. J. Woo, and H. Y. Kim. 2004. Detection of genetically modified maize by multiplex PCR method. J. Microbiol. Biotechnol. 14: 1150-1156 

  6. Kang, T. J., H. K. Song, J. H. Ahn, C. Y. Choi, and H. Joo. 2003. Optimization of programmed suppression in a cellfree protein synthesis system with unnatural amino acid S- (2-nitrobenzyl)cysteine. J. Microbiol. Biotechnol. 13: 344- 347 

  7. Katzen, F., G. Chang, and W. Kudlicki. 2005. The past, present and future of cell-free protein synthesis. Trends Biotechnol. 23: 150-156 

  8. Kim, D. M., T. Kigawa, C. Y. Choi, and S. Yokoyama. 1996. A highly efficient cell-free protein synthesis system from Escherichia coli. Eur. J. Biochem. 239: 881-886 

  9. Kim, T. K., H. D. Shin, M. C. Seo, J. N. Lee, and Y. H. Lee. 2003. Molecular structure of PCR cloned PHA synthase genes of Pseudomonas putida KT2440 and its utilization for medium-chain length polyhydroxyalkanoate production. J. Microbiol. Biotechnol. 13: 182-190 

  10. Lee, K. and S. N. Cohen. 2001. Effects of 3' terminus modifications on mRNA functional decay during in vitro protein synthesis. J. Biol. Chem. 276: 23268-23274 

  11. Matzura, O. and A. Wennborg. 1996. RNAdraw: An integrated program for RNA secondary structure calculation and analysis under 32-bit Microsoft Windows. Comput. Appl. Biosci. 12: 247-249 

  12. Mergulhao, F. J. M., G. A. Monterio, J. M. S. Cabral, and M. A. Taipa. 2004. Design of bacterial vector systems for the production of recombinant proteins in Escherichia coli. J. Microbiol. Biotechnol. 14: 1-14 

  13. Nierlich, D. P. and G. J. Murakawa. 1996. The decay of bacterial messenger RNA. Prog. Nucleic Acid Res. Mol. Biol. 52: 153-216 

  14. Rungpragayphan, S., H. Nakano, and T. Yamane. 2003. PCR-linked in vitro expression: A novel system for highthroughput construction and screening of protein libraries. FEBS Lett. 540: 147-150 

  15. Shaw, W. V. 1975. Chloramphenicol acetyltransferase from chloramphenicol-resistant bacteria. Meth. Enzymol. 43: 737-755 

  16. Tang, J. Y., J. Temsamani, and S. Agrawal. 1993. Selfstabilized antisense oligodeoxynucleotide phosphorothioates: Properties and anti-HIV activity. Nucleic Acids Res. 21: 2729-2735 

  17. Tohda, H., N. Chikazumi, T. Ueda, K. Nishikawa, and K. Watanabe. 1994. Efficient expression of E. coli dihydrofolate reductase gene by an in vitro translation system using phosphorothioate mRNA. J. Biotechnol. 34: 61-69 

  18. Verheijen, J. C., A. M. van Roon, N. J. Meeuwenoord, H. R. Stuivenberg, S. F. Bayly, L. Chen, G. A. van der Marel, P. F. Torrence, et al. 2000. Incorporation of a 4-hydroxy-Nacetylprolinol nucleotide analogue improves the 3'-exonuclease stability of 2'-5'-oligoadenylate-antisense conjugates. Bioorg. Med. Chem. Lett. 10: 801-804 

  19. Yoshizawa, S., T. Ueda, Y. Ishido, K. Miura, K. Watanabe, and I. Hirao. 1994. Nuclease resistance of an extraordinary thermostable mini-hairpin DNA fragment, d(GCGAAGG), and its application to in vitro protein synthesis. Nucleic Acids Res. 22: 2217-2221 

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