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NTIS 바로가기Physiology and Molecular Biology of Plants: an international journal of plant research, v.28 no.2, 2022년, pp.333 - 346
Shan, Chunmiao , Zhao, Liqiang , Shi, Yuanyuan , Zhang, Shengxiang , Wu, Huan , Yang, Mo , Yang, Qingshan , Wu, Jiawen
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Akira, S, Jun M, Erika M, Shin M, Eiichiro O (2016) De novo transcriptomes of forsythia koreana using a novel assembly method: insight into tissue- and species-specific expression of lignan biosynthesis-related gene. Plos ONE
Anthony B, Marc L, Bjoern, Usadel (2014) Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics (Oxford, England)
Genome Res S Audic 7 986 1997 10.1101/gr.7.10.986 Audic S, Claverie JM (1997) The significance of digital gene expression profiles. Genome Res 7:986
Plant Mol Biol D Bhattacharyya 92 1 2016 10.1007/s11103-016-0492-5 Bhattacharyya D, Hazra S, Banerjee A, Datta R, Kumar D, Chakrabarti S, Chattopadhyay S (2016) Transcriptome-wide identification and characterization of CAD isoforms specific for podophyllotoxin biosynthesis from Podophyllum hexandrum. Plant Mol Biol 92:1-23
10.1186/1471-2105-12-323 Bo, LiColin & Dewey (2011) RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome. Bmc Bioinformatics.
J Chromatogr A R Bos 966 233 2002 10.1016/S0021-9673(02)00704-5 Bos R, Koulman A, Woerdenbag HJ, Quax WJ, Pras N (2002) Volatile components from Anthriscus sylvestris (L.) Hoffm. J Chromatogr A 966:233-238
Planta Med XL Chang 70 474 2004 10.1055/s-2004-818981 Chang XL, Min JS, Ju HK, Moon TC, Lee E, Kim SH, Kim MJ, Son JK, Lee SH, Chang HW (2004) Deoxypodophyllotoxin, a Naturally Occurring Lignan, inhibits the Passive Cutaneous Anaphylaxis Reaction. Planta Med 70:474-476
BMC Genomics J Chen 14 857 2013 10.1186/1471-2164-14-857 Chen J, Dong X, Li Q, Zhou X, Chen W (2013) Biosynthesis of the active compounds of Isatis indigotica based on transcriptome sequencing and metabolites profiling. BMC Genomics 14:857-857
Nuclc Acids Research Y Chen 43 7762 2015 10.1093/nar/gkv784 Chen Y, Ye W, Zhang Y, Xu Y (2015) High speed BLASTN: an accelerated MegaBLAST search tool. Nuclc Acids Research 43:7762
BMC Syst Biol Z Chen 5 1 2011 10.1186/1752-0509-5-S3-S1 Chen Z, Liu J, Ng HK, Nadarajah S, Kaufman HL, Yang JY, Deng Y (2011) Statistical methods on detecting differentially expressed genes for RNA-seq data. BMC Syst Biol 5:1-9
Bioinformatics A Conesa 21 3674 2005 10.1093/bioinformatics/bti610 Conesa A, Gotz S, Garcia-Gomez J, Terol J, Talon M, Robles M (2005) Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21:3674-3676
Planta C Corbin 246 1 2017 10.1007/s00425-017-2701-0 Corbin C, Drouet S, Mateljak I, Markulin L, Hano C (2017) Functional characterization of the pinoresinol-lariciresinol reductase-2 gene reveals its roles in yatein biosynthesis and flax defense response. Planta 246:1-16
Curr Opin Biotechnol LB Davin 16 407 2005 10.1016/j.copbio.2005.06.011 Davin LB, Lewis NG (2005) Lignin primary structures and dirigent sites. Curr Opin Biotechnol 16:407-415
Plant J Cell Mole Biol J Ehlting 27 455 2010 10.1046/j.1365-313X.2001.01122.x Ehlting J, Shin JJK, Douglas CJ (2010) Identification of 4-coumarate:coenzyme A ligase (4CL) substrate recognition domains. Plant J Cell Mole Biol 27:455-465
Estela G, Andrés A, Gisela M, Esther del O, José (2013) Analgesic and anti-inflammatory activity of podophyllotoxin derivatives. Pharm Biol.
Nat Biotechnol MG Grabherr 29 644 2013 10.1038/nbt.1883 Grabherr MG, Haas BJ, Yassour M, Levin JZ, Amit I (2013) Trinity: reconstructing a full-length transcriptome without a genome from RNA-Seq data. Nat Biotechnol 29:644
J Plant Res K Hamada 117 303 2004 10.1007/s10265-004-0159-1 Hamada K, Nishida T, Yamauchi K, Fukushima K, Kondo R, Tsutsumi Y (2004) 4-Coumarate:coenzyme A ligase in black locust (Robinia pseudoacacia) catalyses the conversion of sinapate to sinapoyl-CoA. J Plant Res 117:303-310
J Agric Food Chem O Hendrawati 59 8132 2011 10.1021/jf200177q Hendrawati O, Woerdenbag HJ, Hille J, Quax WJ, Kayser O (2011) Seasonal variations in the deoxypodophyllotoxin content and yield of Anthriscus sylvestris L. (Hoffm.) grown in the field and under controlled conditions. J Agric Food Chem 59:8132-8139
Protn Expr Purif LS Hsieh 71 224 2010 10.1016/j.pep.2010.01.009 Hsieh LS, Yeh CS, Pan HC, Cheng CY, Yang CC, Lee PD (2010) Cloning and expression of a phenylalanine ammonia-lyase gene (BoPAL2) from Bambusa oldhamii in Escherichia coli and Pichia pastoris. Protn Expr Purif 71:224-230
IEEE/ACM Trans Comput Biol Bioinf HA Chowdhury 17 2 566 2018 Chowdhury HA, Bhattacharyya DK, Kalita J (2018) Differential expression analysis of RNA-seq reads: overview, taxonomy and tools. IEEE/ACM Trans Comput Biol Bioinf 17(2):566-586
Evid Based Complement Altern Med JC Hwa 2013 1 2013 Hwa JC, Heemun K, Jiyun A, Keun JS, Young UM, Kun-Ho S, Wan KT, Youl HT (2013) Anthricin Isolated from Anthriscus sylvestris (L.) Hoffm. Inhibits the Growth of Breast Cancer Cells by Inhibiting Akt/mTOR Signaling, and Its Apoptotic Effects Are Enhanced by Autophagy Inhibition. Evid Based Complement Altern Med 2013:1-9
Am J Bot M Iorizzo 100 5 930 2013 10.3732/ajb.1300055 Iorizzo M, Senalik DA, Ellison SL, Grzebelus D, Cavagnaro PF, Allender C, Brunet J, Spooner DM, Van Deynze A, Simon PW (2013) Genetic structure and domestication of carrot (Daucus carota subsp. sativus) (Apiaceae). Am J Bot 100(5):930-938
Planta N Javadian 245 1165 2017 10.1007/s00425-017-2671-2 Javadian N, Karimzadeh G, Sharifi M, Moieni A, Behmanesh M (2017) In vitro polyploidy induction: changes in morphology, podophyllotoxin biosynthesis, and expression of the related genes in Linum album (Linaceae). Planta 245:1165-1178
Biol Pharm Bull GS Jeong 30 1340 2007 10.1248/bpb.30.1340 Jeong GS, Kwon OK, Park BY, Oh SR, Ahn KS, Chang MJ, Oh WK, Kim JC, Min BS, Kim YC (2007) Lignans and coumarins from the roots of anthriscus sylvestris and their increase of caspase-3 activity in HL-60 cells. Biol Pharm Bull 30:1340-1343
Jiali Z, Linjuan O, Jialin L, Haohua H, Changlan Z, Xiaosong P, Xiaopeng H, Junru F, Xiaorong C, Jianmin B (2018) Whole genome analysis and stress expression research of PAL gene in rice. Genomics Appl Biol
PLoS ONE Q Jin 8 e62352 2013 10.1371/journal.pone.0062352 Jin Q, Yao Y, Cai Y, Lin Y (2013) Molecular cloning and sequence analysis of a phenylalanine ammonia-lyase gene from dendrobium. PLoS ONE 8:e62352
J Biol Chem KW Kim 287 33957 2012 10.1074/jbc.M112.387423 Kim KW, Moinuddin SGA, Atwell KM, Costa MA, Lewis NG (2012) Opposite Stereoselectivities of Dirigent Proteins in Arabidopsis and Schizandra Species. J Biol Chem 287:33957
J Biol Chem KW Kim 290 1308 2015 10.1074/jbc.M114.611780 Kim KW, Smith CA, Daily MD, Cort JR, Davin LB, Lewis NG (2015) Trimeric structure of (+)-pinoresinol-forming dirigent protein at 1.95 resolution with three isolated active sites. J Biol Chem 290:1308-1318
Ence W Lau 349 1224 2015 10.1126/science.aac7202 Lau W, Sattely ES (2015) Six enzymes from mayapple that complete the biosynthetic pathway to the etoposide aglycone. Ence 349:1224-1228
Science LB Davin 275 5298 362 1997 10.1126/science.275.5298.362 Davin LB, Wang HB, Crowell AL, Bedgar DL (1997) Stereoselective bimolecular phenoxy radical coupling by an auxiliary (dirigent) protein without an active center. Science 275(5298):362-367
Structure Z Li 23 2032 2015 10.1016/j.str.2015.08.012 Li Z, Nair S (2015) Structural basis for specificity and flexibility in a plant 4-coumarate:CoA ligase. Structure 23:2032-2042
Enzyme & Microbial Technol W Lin 112 52 2018 10.1016/j.enzmictec.2017.10.010 Lin W, Liu A, Weng C, Li H, Shiwei S (2018) Cloning and characterization of a novel phenylalanine ammonia-lyase gene from Inonotus baumii. Enzyme & Microbial Technol 112:52-58
Planta Med C Lin 72 786 2006 10.1055/s-2006-931607 Lin C, Lee E, Jin M, Yook J, Quan Z, Ha K, Moon T, Kim M, Kim K, Lee S (2006) Deoxypodophyllotoxin (DPT) Inhibits Eosinophil Recruitment into the Airway and Th2 Cytokine Expression in an OVA-Induced Lung Inflammation. Planta Med 72:786-791
Molecules XY Liu 23 595 2018 10.3390/molecules23030595 Liu XY, Wang PP, Wu YF, Cheng AX, Lou HX (2018) Cloning and functional characterization of two 4-coumarate: CoA ligase genes from Selaginella moellendorffii. Molecules 23:595
Liu Y (2009) Studies on quality standard of Anthriscus sylvestris. Southwest Jiaotong University.
Methods KJ Livak 25 402 2001 10.1006/meth.2001.1262 Livak KJ, T. D. Schmittgen†, (2001) Analysis of relative gene expression data using real- time quantitative PCR and the 2 CT method. Methods 25:402-408
BMC Genomics C Ma 20 1 2019 10.1186/s12864-019-5730-1 Ma C, Liang B, Chang B, Yan J, Zhao Z (2019) Transcriptome profiling of anthocyanin biosynthesis in the peel of “Granny Smith” apples (Malus domestica) after bag removal. BMC Genomics 20:1-8
Planta L Markulin 249 1695 2019 10.1007/s00425-019-03137-y Markulin L, Corbin C, Renouard S, Drouet S, Gutierrez L, Mateljak I, Auguin D, Hano C, Fuss E, Lainé E (2019) Pinoresinol-lariciresinol reductases, key to the lignan synthesis in plants. Planta 249:1695-1714
Miaomiao L, Jinhang Z, Shengbing W, Chenkai W, Xingyi, Guo (2018) De novo assembly and analysis of the Artemisia argyi transcriptome and identification of genes involved in terpenoid biosynthesis. Sci Rep
10.1093/nar/gkt263 Mistry J, Finn RD, Eddy SR, Bateman A, Punta M (2013) Challenges in homology search: HMMER3 and convergent evolution of coiled-coil regions. Nucleic Acids Res
Molecules O Octavian 20 15003 2015 10.3390/molecules200815003 Octavian O, George N, Alina O, Cristina DP (2015a) Ethnomedicinal, Phytochemical and Pharmacological Profile of Anthriscus sylvestris as an Alternative Source for Anticancer Lignans. Molecules 20:15003-15022
Phytochemistry D Ori 192 2021 10.1016/j.phytochem.2021.112958 Ori D, Bereni S, Duan K, Mimica-Duki N (2021) Comprehensive study of Anthriscus sylvestris lignans. Phytochemistry 192:112958
10.1007/s00709-015-0938-7 Kumar P, Jaiswal V, Pal T, Singh J, Chauhan RS (2017) Comparative whole-transcriptome analysis in Podophyllum species identifies key transcription factors contributing to biosynthesis of podophyllotoxin in P. hexandrum. Protoplasma
Bioinformatics G Pertea 19 651 2003 10.1093/bioinformatics/btg034 Pertea G, Huang X, Liang F, Antonescu V, Sultana R, Karamycheva S, Lee Y, White J, Cheung F, Parvizi B (2003) TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets. Bioinformatics 19:651-652
Am J Bot TLR Qiang Sun 95 1498 2008 10.3732/ajb.0800061 Qiang Sun TLR, Matthews MA (2008) Wound-induced vascular occlusions in Vitis vinifera (Vitaceae): Tyloses in summer and gels in winter1. Am J Bot 95:1498-1505
Trends Genet P Rice 16 276 2000 10.1016/S0168-9525(00)02024-2 Rice P, Longden I, Bleasby A (2000) EMBOSS: The European Molecular Biology Open Software Suite. Trends Genet 16:276-277
Plant Cell H Ritter 16 3426 2004 10.1105/tpc.104.025288 Ritter H, Schulz GE (2004) Structural basis for the entrance into the phenylpropanoid metabolism catalyzed by phenylalanine ammonia-lyase. Plant Cell 16:3426-3436
10.1039/b304411d Sakakibara N, Suzuki S, Umezawa T, Shimada M (2003) Biosynthesis of yatein in Anthriscus sylvestris. Org Biomole Chem 1
J Plant Physiol E Sanchez-Elordi 244 153087 2020 10.1016/j.jplph.2019.153087 Sanchez-Elordi E, Sterling RM, Santiago R, de Armas R, Vicente C, Legaz ME (2020) Increase in cytotoxic lignans production after smut infection in sugar cane plants. J Plant Physiol 244:153087
BMC Genomics C Shan 21 49 2020 10.1186/s12864-020-6454-y Shan C, Wang C, Zhang S, Shi Y, Ma K, Yang Q, Wu J (2020) Transcriptome analysis of Clinopodium gracile (Benth.) Matsum and identification of genes related to Triterpenoid Saponin biosynthesis. BMC Genomics 21:49
Sharifi M, Moieni A, Behmanesh M, Karimzadeh G, Javadian, Neda (2017) In vitro polyploidy induction: changes in morphology, podophyllotoxin biosynthesis, and expression of the related genes in Linum album (Linaceae). Planta: An Int J Plant Biol
Am J Bot AA Snow 85 794 1998 10.2307/2446414 Snow AA, Moran-Palma P, Rieseberg LH, Wszelaki A, Seiler GJ (1998) Fecundity, phenology, and seed dormancy of F1 wild-crop hybrids in sunflower (Helianthus annuus, Asteraceae). Am J Bot 85:794-801
Mini-Rev Med Chem A Solyomváry 17 1053 2017 10.2174/1389557516666160614005828 Solyomváry A, Beni S, Boldizsar I (2017) Dibenzylbutyrolactone Lignans-a review of their structural diversity, biosynthesis, occurrence, identification and importance. Mini-Rev Med Chem 17:1053-1074
J Wood Ence S Suzuki 53 273 2007 10.1007/s10086-007-0892-x Suzuki S, Umezawa T (2007) Biosynthesis of lignans and norlignans. J Wood Ence 53:273-284
Plant Methods C Wang 15 65 2019 10.1186/s13007-019-0441-9 Wang C, Peng D, Zhu J, Zhao D, Shi Y, Zhang S, Ma K, Wu J, Huang L (2019) Transcriptome analysis of Polygonatum cyrtonema Hua: identification of genes involved in polysaccharide biosynthesis. Plant Methods 15:65
Am J Bot. L Wang 99 10 e394 2012 10.3732/ajb.1200081 Wang L, Zhang Y, Qi X, Gao Y, Zhang X (2012) Development and characterization of 59 polymorphic cDNA-SSR markers for the edible oil crop Sesamum indicum (Pedaliaceae). Am J Bot. 99(10):e394-398
Planta Y Wang 243 297 2016 10.1007/s00425-015-2453-7 Wang Y, Lu W, Deng D (2016) Bioinformatic landscapes for plant transcription factor system research. Planta 243:297-304
Oncotarget Y Wang 6 29497 2015 10.18632/oncotarget.4985 Wang Y, Wang B, Guerram M, Sun L, Shi W (2015) Deoxypodophyllotoxin suppresses tumor vasculature in HUVECs by promoting cytoskeleton remodeling through LKB1-AMPK dependent Rho A activation. Oncotarget 6:29497-29512
10.2174/1386207323999201103221952 Yang J, Zhang C, Li W-H, Zhang T-E, Fan G-Z, Guo B-F, Yao W-Y, Gong D-H, Peng Q-L, Ding W-J (2020) comprehensive analysis of transcriptomics and metabolomics between the heads and tails of angelica sinensis: genes related to phenylpropanoid biosynthesis pathway. Comb Chem High Throughput Screen, 23
PLoS ONE Y Ying 9 e110947 2014 10.1371/journal.pone.0110947 Ying Y, Xiao-Tao J, Tong Z, Ouzounis CA (2014) Evaluation of a Hybrid Approach Using UBLAST and BLASTX for Metagenomic Sequences Annotation of Specific Functional Genes. PLoS ONE 9:e110947
Oxford Open Y Chen 7 1 1 2018 Chen Y, Chen Y, Shi C et al (2018) SOAPnuke: a MapReduce acceleration-supported software for integrated quality control and preprocessing of high-throughput sequencing data. Oxford Open 7(1):1-6
Appl Microbiol Biotechnol Y Zhang 99 11 4629 2015 10.1007/s00253-015-6491-7 Zhang Y, Shi J, Gao Z, Yangwu R, Jiang H, Che J, Liu Y (2015) Production of pinoresinol diglucoside, pinoresinol monoglucoside, and pinoresinol by Phomopsis sp. XP-8 using mung bean and its major components. Appl Microbiol Biotechnol 99(11):4629-4643
Gene L Zhao 791 145713 2021 10.1016/j.gene.2021.145713 Zhao L, Zhang S, Shan C, Shi Y, Wu H, Wu J, Peng D (2021) De novo transcriptome assembly of Angelica dahurica and characterization of coumarin biosynthesis pathway genes. Gene 791:145713
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