참고문헌 (124)

1. Bioinformatics Abascal 21 2104 2005 10.1093/bioinformatics/bti263 ProtTest: selection of best-fit models of protein evolution 

   상세보기

2. Mech Dev. Ahn 95 253 2000 10.1016/S0925-4773(00)00346-4 tbx20, a new vertebrate T-box gene expressed in the cranial motor neurons and developing cardiovascular structures in zebrafish 

   상세보기

3. Gene Exp Patterns. Albalat 10 24 2010 10.1016/j.gep.2009.11.003 Identification and characterisation of the developmental expression pattern of tbx5b, a novel tbx5 gene in zebrafish 

   상세보기

4. Nature Alfoldi 477 587 2011 10.1038/nature10390 The genome of the green anole lizard and a comparative analysis with birds and mammals 

   상세보기

5. Syst Biol. Anisimova 55 539 2006 10.1080/10635150600755453 Approximate likelihood-ratio test for branches: a fast, accurate, and powerful alternative 

   상세보기

6. Nat Rev Genet. Bailey 7 552 2006 10.1038/nrg1895 Primate segmental duplications: crucibles of evolution, diversity and disease 

   상세보기

7. Genome Res. Barbazuk 10 1351 2000 10.1101/gr.144700 The syntenic relationship of the zebrafish and human genomes 

   상세보기

8. Mech Dev. Begemann 114 137 2002 10.1016/S0925-4773(02)00040-0 Cloning of zebrafish T-box genes tbx15 and tbx18 and their expression during embryonic development 

   상세보기

9. Gene Exp Patterns. Belgacem 11 239 2011 10.1016/j.gep.2010.12.006 Amphioxus Tbx6/16 and Tbx20 embryonic expression patterns reveal ancestral functions in chordates 

   상세보기

10. Cladistics Bergsten 21 163 2005 10.1111/j.1096-0031.2005.00059.x A review of long-branch attraction 

    상세보기

11. Genome Biol. Blomme 7 R43 2006 10.1186/gb-2006-7-5-r43 The gain and loss of genes during 600 million years of vertebrate evolution 

    상세보기

12. Proc Natl Acad Sci U S A. Braasch 108 E47 2011 10.1073/pnas.1101594108 The teleost agouti-related protein 2 gene is an ohnolog gone missing from the tetrapod genome 

    상세보기

13. Mol Biol Evol. Braasch 26 783 2009 10.1093/molbev/msp015 The endothelin system: evolution of vertebrate-specific ligand/receptor interactions by three rounds of genome duplication 

    상세보기

14. Dev Dyn. Brend 238 2745 2009 10.1002/dvdy.22100 Expression of the oscillating gene her1 is directly regulated by hairy/enhancer of split, T-box, and suppressor of hairless proteins in the zebrafish segmentation clock 

    상세보기

15. Mol Biol Evol. Brunet 23 1808 2006 10.1093/molbev/msl049 Gene loss and evolutionary rates following whole-genome duplication in teleost fishes 

    상세보기

16. Dev Biol. Callery 340 75 2010 10.1016/j.ydbio.2010.01.013 A divergent Tbx6-related gene and Tbx6 are both required for neural crest and intermediate mesoderm development in Xenopus 

    상세보기

17. Nat Rev Genet. Canestro 8 932 2007 10.1038/nrg2226 Evolutionary developmental biology and genomics 

    상세보기

18. Genome Res. Catchen 19 1497 2009 10.1101/gr.090480.108 Automated identification of conserved synteny after whole-genome duplication 

    상세보기

19. Dev Biol. Chapman 180 534 1996 10.1006/dbio.1996.0326 Tbx6, a mouse T-box gene implicated in paraxial mesoderm formation at gastrulation 

    상세보기

20. Mech Dev. Chapman 120 837 2003 10.1016/S0925-4773(03)00066-2 Critical role for Tbx6 in mesoderm specification in the mouse embryo 

    상세보기

21. Nature Chapman 391 695 1998 10.1038/35624 Three neural tubes in mouse embryos with mutations in the T-box gene Tbx6 

    상세보기

22. Mol Biol Evol. Christoffels 21 1146 2004 10.1093/molbev/msh114 Fugu genome analysis provides evidence for a whole-genome duplication early during the evolution of ray-finned fishes 

    상세보기

23. Genome Res. Conant 13 2052 2003 10.1101/gr.1252603 Asymmetric sequence divergence of duplicate genes 

    상세보기

24. Genome Res. Curwen 14 942 2004 10.1101/gr.1858004 The Ensembl automatic gene annotation system 

    상세보기

25. Mol Biol Evol. D’Aniello 25 1841 2008 10.1093/molbev/msn132 Gene expansion and retention leads to a diverse tyrosine kinase superfamily in amphioxus 

    상세보기

26. PLoS Biol. Dehal 3 e314 2005 10.1371/journal.pbio.0030314 Two rounds of whole genome duplication in the ancestral vertebrate 

    상세보기

27. Brief Bioinform. Dewey 12 401 2011 10.1093/bib/bbr040 Positional orthology: putting genomic evolutionary relationships into context 

    상세보기

28. Development Dheen 126 2703 1999 10.1242/dev.126.12.2703 Zebrafish tbx-c functions during formation of midline structures 

    상세보기

29. Proc Natl Acad Sci U S A. Eckhart 105 18419 2008 10.1073/pnas.0805154105 Identification of reptilian genes encoding hair keratin-like proteins suggests a new scenario for the evolutionary origin of hair 

    상세보기

30. Nucleic Acids Res. Edgar 32 1792 2004 10.1093/nar/gkh340 MUSCLE: multiple sequence alignment with high accuracy and high throughput 

    상세보기

31. J Mol Evol. Felsenstein 17 368 1981 10.1007/BF01734359 Evolutionary trees from DNA sequences: a maximum likelihood approach 

    상세보기

32. Evolution Felsenstein 39 783 1985 10.2307/2408678 Confidence limits on phylogenies: an approach using the bootstrap 

    상세보기

33. Syst Zool. Fitch 19 99 1970 10.2307/2412448 Distinguishing homologous from analogous proteins 

    상세보기

34. Genetics Force 151 1531 1999 10.1093/genetics/151.4.1531 Preservation of duplicate genes by complementary, degenerative mutations 

    상세보기

35. J Mol Evol. Franck 59 792 2004 10.1007/s00239-004-0013-z Evolutionary diversity of vertebrate small heat shock proteins 

    상세보기

36. Development Garnett 136 749 2009 10.1242/dev.024703 Identification of direct T-box target genes in the developing zebrafish mesoderm 

    상세보기

37. Mol Biol Evol. Gascuel 14 685 1997 10.1093/oxfordjournals.molbev.a025808 BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data 

    상세보기

38. J Hered. Genome 10K Community of Scientists 100 659 2009 10.1093/jhered/esp086 Genome 10K: a proposal to obtain whole-genome sequence for 10,000 vertebrate species 

    상세보기

39. BMC Evol Biol. Gillis 9 207 2009 10.1186/1471-2148-9-207 Whole genome duplications and expansion of the vertebrate GATA transcription factor gene family 

    상세보기

40. Proc Natl Acad Sci U S A. Goering 100 9410 2003 10.1073/pnas.1633548100 An interacting network of T-box genes directs gene expression and fate in the zebrafish mesoderm 

    상세보기

41. Cell Mol Life Sci. Gogvadze 66 3727 2009 10.1007/s00018-009-0107-2 Retroelements and their impact on genome evolution and functioning 

    상세보기

42. Mol Biol Evol. Gouy 27 221 2010 10.1093/molbev/msp259 SeaView version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building 

    상세보기

43. Syst Biol. Graybeal 47 9 1998 10.1080/106351598260996 Is it better to add taxa or characters to a difficult phylogenetic problem? 

    상세보기

44. Development Griffin 125 3379 1998 10.1242/dev.125.17.3379 Molecular identification of spadetail: regulation of zebrafish trunk and tail mesoderm formation by T-box genes 

    상세보기

45. Syst Biol. Guindon 52 696 2003 10.1080/10635150390235520 A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood 

    상세보기

46. PLoS One Hadjantonakis 3 e2511 2008 10.1371/journal.pone.0002511 Tbx6 regulates left/right patterning in mouse embryos through effects on nodal cilia and perinodal signaling 

    상세보기

47. J Cell Biochem. Hammer 104 1022 2008 10.1002/jcb.21686 Characterization of TBX20 in human hearts and its regulation by TFAP2 

    상세보기

48. Science Hellsten 328 633 2010 10.1126/science.1183670 The genome of the western clawed frog Xenopus tropicalis 

    상세보기

49. BMC Genomics Henricson 11 412 2010 10.1186/1471-2164-11-412 Orthology confers intron position conservation 

    상세보기

50. Dev Biol. Hitachi 313 816 2008 10.1016/j.ydbio.2007.10.015 Tbx6, Thylacine1, and E47 synergistically activate Bowline expression in Xenopus somitogenesis 

    상세보기

51. Nature Ho 348 728 1990 10.1038/348728a0 Cell-autonomous action of zebrafish spt-1 mutation in specific mesodermal precursors 

    상세보기

52. BMC Genomics Hoegg 8 317 2007 10.1186/1471-2164-8-317 Comparative phylogenomic analyses of teleost fish Hox gene clusters: lessons from the cichlid fish Astatotilapia burtoni 

    상세보기

53. Dev Suppl. Holland 1994 125 1994 Gene duplications and the origins of vertebrate development 

    상세보기

54. Dev Biol. Hug 183 61 1997 10.1006/dbio.1996.8490 tbx6, a Brachyury-related gene expressed by ventral mesendodermal precursors in the zebrafish embryo 

    상세보기

55. EMBO J. Hurlin 18 7019 1999 10.1093/emboj/18.24.7019 Mga, a dual-specificity transcription factor that interacts with Max and contains a T-domain DNA-binding motif 

    상세보기

56. Nature International Chicken Genome Sequencing Consortium 432 695 2004 10.1038/nature03154 Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution 

    상세보기

57. Nucleic Acids Res. Irimia 36 1703 2008 10.1093/nar/gkn012 Spliceosomal introns as tools for genomic and evolutionary analysis 

    상세보기

58. Nature Jaillon 431 946 2004 10.1038/nature03025 Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype 

    상세보기

59. Dev Dyn. Jezewski 238 1605 2009 10.1002/dvdy.21962 Alternative splicing, phylogenetic analysis, and craniofacial expression of zebrafish tbx22 

    상세보기

60. Comput Appl Biosci. Jones 8 275 1992 The rapid generation of mutation data matrices from protein sequences 

61. J Exp Zool B Mol Dev Evol. Jovelin 314 33 2010 10.1002/jez.b.21307 Evolution of developmental regulation in the vertebrate FgfD subfamily 

    상세보기

62. BMC Genomics Jun 10 630 2009 10.1186/1471-2164-10-630 Identification of mammalian orthologs using local synteny 

    상세보기

63. Nature Kasahara 447 714 2007 10.1038/nature05846 The medaka draft genome and insights into vertebrate genome evolution 

    상세보기

64. Nature Kellis 428 617 2004 10.1038/nature02424 Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae 

    상세보기

65. Nature Kimmel 337 358 1989 10.1038/337358a0 A mutation that changes cell movement and cell fate in the zebrafish embryo 

    상세보기

66. Am J Med Genet A. King 140 1407 2006 10.1002/ajmg.a.31250 T-genes and limb bud development 

    상세보기

67. Development Knezevic 124 411 1997 10.1242/dev.124.2.411 Two novel chick T-box genes related to mouse Brachyury are expressed in different, non-overlapping mesodermal domains during gastrulation 

    상세보기

68. Brief Bioinform. Kristensen 12 379 2011 10.1093/bib/bbr030 Computational methods for gene orthology inference 

    상세보기

69. Trends Genet. Kuzniar 24 539 2008 10.1016/j.tig.2008.08.009 The quest for orthologs: finding the corresponding gene across genomes 

    상세보기

70. Dev Genes Evol. Lardelli 213 519 2003 10.1007/s00427-003-0348-2 The evolutionary relationships of zebrafish genes tbx6, tbx16/spadetail, and mga 

    상세보기

71. Mol Biol Evol. Le 25 1307 2008 10.1093/molbev/msn067 An improved general amino acid replacement matrix 

    상세보기

72. J Biol Chem. Lingbeek 277 26120 2002 10.1074/jbc.M200403200 The T-box repressors TBX2 and TBX3 specifically regulate the tumor suppressor gene p14ARF via a variant T-site in the initiator 

    상세보기

73. Cell Res. Lou 16 771 2006 10.1038/sj.cr.7310093 Xenopus Tbx6 mediates posterior patterning via activation of Wnt and FGF signaling 

    상세보기

74. Proc Natl Acad Sci U S A. Makino 107 9270 2010 10.1073/pnas.0914697107 Ohnologs in the human genome are dosage balanced and frequently associated with disease 

    상세보기

75. Dev Cell. Martin 15 121 2008 10.1016/j.devcel.2008.04.013 Regulation of canonical Wnt signaling by Brachyury is essential for posterior mesoderm formation 

    상세보기

76. Bioessays Meyer 27 937 2005 10.1002/bies.20293 From 2R to 3R: evidence for a fish-specific genome duplication (FSGD) 

    상세보기

77. Brief Funct Genomic Proteomic. Minguillon 2 224 2003 10.1093/bfgp/2.3.224 The comparative genomics of T-box genes 

    상세보기

78. Dev Dyn. Mitani 215 62 1999 10.1002/(SICI)1097-0177(199905)215:1<62::AID-DVDY7>3.0.CO;2-X An ascidian T-box gene As-T2 is related to the Tbx6 subfamily and is associated with embryonic muscle cell differentiation 

    상세보기

79. FEBS J. Mitra 277 128 2010 10.1111/j.1742-4658.2009.07460.x Identification and characterization of the transcription factors involved in T-cell development, t-bet, stat6 and foxp3, within the zebrafish, Danio rerio 

    상세보기

80. Nature Mouse Genome Sequencing Consortium 420 520 2002 10.1038/nature01262 Initial sequencing and comparative analysis of the mouse genome 

    상세보기

81. Bioinformatics Muffato 26 1119 2010 10.1093/bioinformatics/btq079 Genomicus: a database and a browser to study gene synteny in modern and ancestral genomes 

    상세보기

82. Nature Muller 389 884 1997 10.1038/39929 Crystallographic structure of the T domain-DNA complex of the Brachyury transcription factor 

    상세보기

83. Annu Rev Genet. Naiche 39 219 2005 10.1146/annurev.genet.39.073003.105925 T-box genes in vertebrate development 

    상세보기

84. Genome Res. Nakatani 17 1254 2007 10.1101/gr.6316407 Reconstruction of the vertebrate ancestral genome reveals dynamic genome reorganization in early vertebrates 

    상세보기

85. Nat Genet. Nikaido 31 195 2002 10.1038/ng899 tbx24, encoding a T-box protein, is mutated in the zebrafish somite-segmentation mutant fused somites 

    상세보기

86. Dev Biol. Oates 283 204 2005 10.1016/j.ydbio.2005.04.012 Generation of segment polarity in the paraxial mesoderm of the zebrafish through a T-box-dependent inductive event 

    상세보기

87. Hum Mol Genet. Packham 12 R37 2003 10.1093/hmg/ddg077 T-box genes in human disorders 

    상세보기

88. Bioessays Papaioannou 20 9 1998 10.1002/(SICI)1521-1878(199801)20:1<9::AID-BIES4>3.0.CO;2-Q The T-box gene family 

    상세보기

89. Cell Mol Immunol. Peng 3 87 2006 The T-box transcription factor T-bet in immunity and autoimmunity 

90. Development Piotrowski 130 5043 2003 10.1242/dev.00704 The zebrafish van gogh mutation disrupts tbx1, which is involved in the DiGeorge deletion syndrome in humans 

    상세보기

91. Dev Dyn. Plageman 232 11 2005 10.1002/dvdy.20201 T-box genes and heart development: putting the “T” in heart 

    상세보기

92. J Exp Zool B Mol Dev Evol. Postlethwait 308 563 2007 10.1002/jez.b.21137 The zebrafish genome in context: ohnologs gone missing 

    상세보기

93. Genome Res. Postlethwait 10 1890 2000 10.1101/gr.164800 Zebrafish comparative genomics and the origins of vertebrate chromosomes 

    상세보기

94. Nature Putnam 453 1064 2008 10.1038/nature06967 The amphioxus genome and the evolution of the chordate karyotype 

    상세보기

95. Development. Reim 130 3187 2003 10.1242/dev.00548 The T-box-encoding Dorsocross genes function in amnioserosa development and the patterning of the dorsolateral germ band downstream of Dpp 

    상세보기

96. Dev Genes Evol. Ruvinsky 210 82 2000 10.1007/s004270050014 The evolution of paired appendages in vertebrates: T-box genes in the zebrafish 

    상세보기

97. Genetics Ruvinsky 156 1249 2000 10.1093/genetics/156.3.1249 Phylogenetic analysis of T-box genes demonstrates the importance of amphioxus for understanding evolution of the vertebrate genome 

    상세보기

98. Dev Genes Evol. Ruvinsky 208 94 1998 10.1007/s004270050158 Characterization of the zebrafish tbx16 gene and evolution of the vertebrate T-box family 

    상세보기

99. Mol Biol Evol. Saitou 4 406 1987 The neighbor-joining method: a new method for reconstructing phylogenetic trees 

    상세보기

100. Development Schulte-Merker 120 1009 1994 10.1242/dev.120.4.1009 no tail (ntl) is the zebrafish homologue of the mouse T (Brachyury) gene 

     상세보기

101. Dev Dyn. Showell 229 201 2004 10.1002/dvdy.10480 T-box genes in early embryogenesis 

     상세보기

102. FEBS J. Sreedharan 278 4881 2011 10.1111/j.1742-4658.2011.08388.x The G protein coupled receptor Gpr153 shares common evolutionary origin with Gpr162 and is highly expressed in central regions including the thalamus, cerebellum and the arcuate nucleus 

     상세보기

103. Mech Dev. Stennard 86 87 1999 10.1016/S0925-4773(99)00119-7 Differential expression of VegT and Antipodean protein isoforms in Xenopus 

     상세보기

104. J Mol Evol. Stoltzfus 49 169 1999 10.1007/PL00006540 On the possibility of constructive neutral evolution 

     상세보기

105. Dev Dyn. Takatori 230 743 2004 10.1002/dvdy.20082 T-box genes in the ascidian Ciona intestinalis: characterization of cDNAs and spatial expression 

     상세보기

106. Dev Biol. Takeuchi 332 90 2009 10.1016/j.ydbio.2009.05.543 Germ layer patterning in bichir and lamprey; an insight into its evolution in vertebrates 

     상세보기

107. Mol Immunol. Takizawa 44 2324 2007 10.1016/j.molimm.2006.11.018 Expression analysis of two eomesodermin homologues in zebrafish lymphoid tissues and cells 

     상세보기

108. Genome Res. Taylor 13 382 2003 10.1101/gr.640303 Genome duplication, a trait shared by 22000 species of ray-finned fish 

     상세보기

109. Dev Dyn. Tazumi 237 3749 2008 10.1002/dvdy.21791 pMesogenin1 and 2 function directly downstream of Xtbx6 in Xenopus somitogenesis and myogenesis 

     상세보기

110. Dev Growth Differ. Uchiyama 43 657 2001 10.1046/j.1440-169X.2001.00606.x Cloning and characterization of the T-box gene Tbx6 in Xenopus laevis 

     상세보기

111. Danio rerio. Development van Eeden 123 153 1996 Mutations affecting somite formation and patterning in the zebrafish 

112. Curr Opin Genet Dev. Wardle 18 418 2008 10.1016/j.gde.2008.07.017 Teasing out T-box targets in early mesoderm 

     상세보기

113. Mech Dev. Watabe-Rudolph 119 251 2002 10.1016/S0925-4773(02)00394-5 The mouse rib-vertebrae mutation is a hypomorphic Tbx6 allele 

     상세보기

114. Genomics Wattler 48 24 1998 10.1006/geno.1997.5150 A combined analysis of genomic and primary protein structure defines the phylogenetic relationship of new members of the T-box family 

     상세보기

115. Development White 130 1681 2003 10.1242/dev.00367 Defective somite patterning in mouse embryos with reduced levels of Tbx6 

     상세보기

116. Genome Biol. Wilson 3 2002 10.1186/gb-2002-3-6-reviews3008 The T-box family 

     상세보기

117. Int J Dev Biol. Yabe 50 681 2006 10.1387/ijdb.062177sy Xtbx6r, a novel T-box gene expressed in the paraxial mesoderm, has anterior neural-inducing activity 

     상세보기

118. Evol Dev. Yamada 9 220 2007 10.1111/j.1525-142X.2007.00154.x Surprisingly complex T-box gene complement in diploblastic metazoans 

     상세보기

119. Development Yasuhiko 135 3511 2008 10.1242/dev.027144 Functional importance of evolutionarily conserved Tbx6 binding sites in the presomitic mesoderm-specific enhancer of Mesp2 

     상세보기

120. Mech Dev. Yonei-Tamura 80 219 1999 10.1016/S0925-4773(98)00219-6 Spatially and temporally-restricted expression of two T-box genes during zebrafish embryogenesis 

     상세보기

121. Mol Biol Evol. Zakon 28 1415 2011 10.1093/molbev/msq325 Expansion of voltage-dependent Na+ channel gene family in early tetrapods coincided with the emergence of terrestriality and increased brain complexity 

     상세보기

122. Genome Biol. Zhang 4 R56 2003 10.1186/gb-2003-4-9-r56 Different evolutionary patterns between young duplicate genes in the human genome 

     상세보기

123. Bioinformatics Zheng 21 703 2005 10.1093/bioinformatics/bti045 Using shared genomic synteny and shared protein functions to enhance the identification of orthologous gene pairs 

     상세보기

124. Syst Biol. Zwickl 51 588 2002 10.1080/10635150290102339 Increased taxon sampling greatly reduces phylogenetic error 

     상세보기

활용도 Top5 논문

더보기

해당 논문의 주제분야에서 활용도가 높은 상위 5개 콘텐츠를 보여줍니다.
더보기 버튼을 클릭하시면 더 많은 관련자료를 살펴볼 수 있습니다.