참고문헌 (37)

1. J Gen Virol Thiel V 2305 84 2003 10.1099/vir.0.19424-0 Mechanisms and enzymes involved in SARS coronavirus genome expression V Thiel, , Mechanisms and enzymes involved in SARS coronavirus genome expression. J Gen Virol 84, 2305-2315 (2003). 

   상세보기

2. Proc Natl Acad Sci USA Yang H 13190 100 2003 10.1073/pnas.1835675100 The crystal structures of severe acute respiratory syndrome virus main protease and its complex with an inhibitor H Yang, , The crystal structures of severe acute respiratory syndrome virus main protease and its complex with an inhibitor. Proc Natl Acad Sci USA 100, 13190-13195 (2003). 

   상세보기

3. Biochemistry Goetz DH 8744 46 2007 10.1021/bi0621415 Substrate specificity profiling and identification of a new class of inhibitor for the major protease of the SARS coronavirus DH Goetz, , Substrate specificity profiling and identification of a new class of inhibitor for the major protease of the SARS coronavirus. Biochemistry 46, 8744-8752 (2007). 

   상세보기

4. PLoS One Chuck C-P e13197 5 2010 10.1371/journal.pone.0013197 Profiling of substrate specificity of SARS-CoV 3CL C-P Chuck, , Profiling of substrate specificity of SARS-CoV 3CL. PLoS One 5, e13197 (2010). 

   상세보기

5. Protein Cell Xia B 282 2 2011 10.1007/s13238-011-1034-1 Activation and maturation of SARS-CoV main protease B Xia, X Kang, Activation and maturation of SARS-CoV main protease. Protein Cell 2, 282-290 (2011). 

   상세보기

6. J Mol Biol Xue X 965 366 2007 10.1016/j.jmb.2006.11.073 Production of authentic SARS-CoV M(pro) with enhanced activity: Application as a novel tag-cleavage endopeptidase for protein overproduction X Xue, , Production of authentic SARS-CoV M(pro) with enhanced activity: Application as a novel tag-cleavage endopeptidase for protein overproduction. J Mol Biol 366, 965-975 (2007). 

   상세보기

7. J Biol Chem Chen S 554 283 2008 10.1074/jbc.M705240200 Mutation of Gly-11 on the dimer interface results in the complete crystallographic dimer dissociation of severe acute respiratory syndrome coronavirus 3C-like protease: Crystal structure with molecular dynamics simulations S Chen, , Mutation of Gly-11 on the dimer interface results in the complete crystallographic dimer dissociation of severe acute respiratory syndrome coronavirus 3C-like protease: Crystal structure with molecular dynamics simulations. J Biol Chem 283, 554-564 (2008a). 

   상세보기

8. J Biochem Chen S 525 143 2008 10.1093/jb/mvm246 Residues on the dimer interface of SARS coronavirus 3C-like protease: Dimer stability characterization and enzyme catalytic activity analysis S Chen, , Residues on the dimer interface of SARS coronavirus 3C-like protease: Dimer stability characterization and enzyme catalytic activity analysis. J Biochem 143, 525-536 (2008b). 

   상세보기

9. J Virol Shi J 4620 82 2008 10.1128/JVI.02680-07 Mechanism for controlling the dimer-monomer switch and coupling dimerization to catalysis of the severe acute respiratory syndrome coronavirus 3C-like protease J Shi, J Sivaraman, J Song, Mechanism for controlling the dimer-monomer switch and coupling dimerization to catalysis of the severe acute respiratory syndrome coronavirus 3C-like protease. J Virol 82, 4620-4629 (2008). 

   상세보기

10. Virology Hu T 324 388 2009 10.1016/j.virol.2009.03.034 Two adjacent mutations on the dimer interface of SARS coronavirus 3C-like protease cause different conformational changes in crystal structure T Hu, , Two adjacent mutations on the dimer interface of SARS coronavirus 3C-like protease cause different conformational changes in crystal structure. Virology 388, 324-334 (2009). 

    상세보기

11. Protein Cell Zhang S 371 1 2010 10.1007/s13238-010-0044-8 Three-dimensional domain swapping as a mechanism to lock the active conformation in a super-active octamer of SARS-CoV main protease S Zhang, , Three-dimensional domain swapping as a mechanism to lock the active conformation in a super-active octamer of SARS-CoV main protease. Protein Cell 1, 371-383 (2010). 

    상세보기

12. J Biol Chem Li C 28134 285 2010 10.1074/jbc.M109.095851 Maturation mechanism of severe acute respiratory syndrome (SARS) coronavirus 3C-like proteinase C Li, , Maturation mechanism of severe acute respiratory syndrome (SARS) coronavirus 3C-like proteinase. J Biol Chem 285, 28134-28140 (2010). 

    상세보기

13. J Biol Chem Hsu M-F 31257 280 2005 10.1074/jbc.M502577200 Mechanism of the maturation process of SARS-CoV 3CL protease M-F Hsu, , Mechanism of the maturation process of SARS-CoV 3CL protease. J Biol Chem 280, 31257-31266 (2005). 

    상세보기

14. Acta Crystallogr D Biol Crystallogr Adams PD 213 66 2010 10.1107/S0907444909052925 PHENIX: a comprehensive Python-based system for macromolecular structure solution PD Adams, , PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr D Biol Crystallogr 66, 213-221 (2010). 

    상세보기

15. Nucleic Acids Res Schneider TD 6097 18 1990 10.1093/nar/18.20.6097 Sequence logos: A new way to display consensus sequences TD Schneider, RM Stephens, Sequence logos: A new way to display consensus sequences. Nucleic Acids Res 18, 6097-6100 (1990). 

    상세보기

16. Genome Res Crooks GE 1188 14 2004 10.1101/gr.849004 WebLogo: A sequence logo generator GE Crooks, G Hon, J-M Chandonia, SE Brenner, WebLogo: A sequence logo generator. Genome Res 14, 1188-1190 (2004). 

    상세보기

17. J Virol Xue X 2515 82 2008 10.1128/JVI.02114-07 Structures of two coronavirus main proteases: Implications for substrate binding and antiviral drug design X Xue, , Structures of two coronavirus main proteases: Implications for substrate binding and antiviral drug design. J Virol 82, 2515-2527 (2008). 

    상세보기

18. Protein Sci Chu L-HM 699 15 2006 10.1110/ps.052007306 Rapid peptide-based screening on the substrate specificity of severe acute respiratory syndrome (SARS) coronavirus 3C-like protease by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry L-HM Chu, W-Y Choy, S-N Tsai, Z Rao, S-M Ngai, Rapid peptide-based screening on the substrate specificity of severe acute respiratory syndrome (SARS) coronavirus 3C-like protease by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Protein Sci 15, 699-709 (2006). 

    상세보기

19. FEBS J Muramatsu T 2002 280 2013 10.1111/febs.12222 Autoprocessing mechanism of severe acute respiratory syndrome coronavirus 3C-like protease (SARS-CoV 3CLpro) from its polyproteins T Muramatsu, , Autoprocessing mechanism of severe acute respiratory syndrome coronavirus 3C-like protease (SARS-CoV 3CLpro) from its polyproteins. FEBS J 280, 2002-2013 (2013). 

    상세보기

20. J Struct Funct Genomics Kigawa T 63 5 2004 10.1023/B:JSFG.0000029204.57846.7d Preparation of Escherichia coli cell extract for highly productive cell-free protein expression T Kigawa, , Preparation of Escherichia coli cell extract for highly productive cell-free protein expression. J Struct Funct Genomics 5, 63-68 (2004). 

    상세보기

21. J Mol Biol Brandl M 357 307 2001 10.1006/jmbi.2000.4473 C-H...π-interactions in proteins M Brandl, MS Weiss, A Jabs, J Sühnel, R Hilgenfeld, C-H...π-interactions in proteins. J Mol Biol 307, 357-377 (2001). 

    상세보기

22. J Virol Oostra M 12323 81 2007 10.1128/JVI.01506-07 Localization and membrane topology of coronavirus nonstructural protein 4: Involvement of the early secretory pathway in replication M Oostra, , Localization and membrane topology of coronavirus nonstructural protein 4: Involvement of the early secretory pathway in replication. J Virol 81, 12323-12336 (2007). 

    상세보기

23. J Virol Oostra M 12392 82 2008 10.1128/JVI.01219-08 Topology and membrane anchoring of the coronavirus replication complex: Not all hydrophobic domains of nsp3 and nsp6 are membrane spanning M Oostra, , Topology and membrane anchoring of the coronavirus replication complex: Not all hydrophobic domains of nsp3 and nsp6 are membrane spanning. J Virol 82, 12392-12405 (2008). 

    상세보기

24. Methods Enzymol Otwinowski Z 307 276 1997 10.1016/S0076-6879(97)76066-X Processing of X-ray diffraction data collected in oscillation mode Z Otwinowski, W Minor, Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol 276, 307-326 (1997). 

    

25. Acta Crystallogr D Biol Crystallogr Winn MD 235 67 2011 10.1107/S0907444910045749 Overview of the CCP4 suite and current developments MD Winn, , Overview of the CCP4 suite and current developments. Acta Crystallogr D Biol Crystallogr 67, 235-242 (2011). 

    상세보기

26. Acta Crystallogr A Jones TA 110 47 1991 10.1107/S0108767390010224 Improved methods for building protein models in electron density maps and the location of errors in these models TA Jones, J-Y Zou, SW Cowan, M Kjeldgaard, Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr A 47, 110-119 (1991). 

    상세보기

27. Acta Crystallogr D Biol Crystallogr Brünger AT 905 54 1998 10.1107/S0907444998003254 Crystallography & NMR system: A new software suite for macromolecular structure determination AT Brünger, , Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr D Biol Crystallogr 54, 905-921 (1998). 

    상세보기

28. Methods Enzymol Kleywegt GJ 525 277 1997 10.1016/S0076-6879(97)77029-0 Detecting folding motifs and similarities in protein structures GJ Kleywegt, TA Jones, Detecting folding motifs and similarities in protein structures. Methods Enzymol 277, 525-545 (1997). 

    

29. Acta Crystallogr D Biol Crystallogr Kleywegt GJ 842 52 1996 10.1107/S0907444995016477 Use of non-crystallographic symmetry in protein structure refinement GJ Kleywegt, Use of non-crystallographic symmetry in protein structure refinement. Acta Crystallogr D Biol Crystallogr 52, 842-857 (1996). 

    상세보기

30. Acta Crystallogr A Kabsch W 922 32 1976 10.1107/S0567739476001873 Solution for the best rotation to relate two sets of vectors W Kabsch, Solution for the best rotation to relate two sets of vectors. Acta Crystallogr A 32, 922-923 (1976). 

    상세보기

31. Biopolymers Kabsch W 2577 22 1983 10.1002/bip.360221211 Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features W Kabsch, C Sander, Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features. Biopolymers 22, 2577-2637 (1983). 

    상세보기

32. J Appl Cryst Laskowski RA 283 26 1993 10.1107/S0021889892009944 PROCHECK: A program to check the stereochemical quality of protein structures RA Laskowski, MW MacArthur, DS Moss, JM Thornton, PROCHECK: A program to check the stereochemical quality of protein structures. J Appl Cryst 26, 283-291 (1993). 

    상세보기

33. The PyMOL Molecular Graphics System DeLano WL 2002 WL DeLano The PyMOL Molecular Graphics System (DeLano Scientific, San Carlos, CA, 2002). 

34. Protein Cell Chen S 59 1 2010 10.1007/s13238-010-0011-4 Liberation of SARS-CoV main protease from the viral polyprotein: N-terminal autocleavage does not depend on the mature dimerization mode S Chen, F Jonas, C Shen, R Hilgenfeld, Liberation of SARS-CoV main protease from the viral polyprotein: N-terminal autocleavage does not depend on the mature dimerization mode. Protein Cell 1, 59-74 (2010). 

    상세보기

35. Biol Chem Ng NM 401 390 2009 10.1515/BC.2009.065 Subsite cooperativity in protease specificity NM Ng, RN Pike, SE Boyd, Subsite cooperativity in protease specificity. Biol Chem 390, 401-407 (2009). 

    상세보기

36. Bioorg Med Chem Kontijevskis A 5229 17 2009 10.1016/j.bmc.2009.05.045 Proteochemometrics mapping of the interaction space for retroviral proteases and their substrates A Kontijevskis, R Petrovska, S Yahorava, J Komorowski, JES Wikberg, Proteochemometrics mapping of the interaction space for retroviral proteases and their substrates. Bioorg Med Chem 17, 5229-5237 (2009). 

    상세보기

37. Protein Eng Wallace AC 127 8 1995 10.1093/protein/8.2.127 LIGPLOT: A program to generate schematic diagrams of protein-ligand interactions AC Wallace, RA Laskowski, JM Thornton, LIGPLOT: A program to generate schematic diagrams of protein-ligand interactions. Protein Eng 8, 127-134 (1995). 

    상세보기