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Epidemiological and Genome-Wide Association Study of Gastritis or Gastric Ulcer in Korean Populations 원문보기

Genomics & informatics, v.12 no.3, 2014년, pp.127 - 133  

Oh, Sumin (Department of Nanobiomedical Science, Dankook University) ,  Oh, Sejong (Department of Nanobiomedical Science, Dankook University)

Abstract AI-Helper 아이콘AI-Helper

Gastritis is a major disease that has the potential to grow as gastric cancer. Gastric cancer is a very common cancer, and it is related to a very high mortality rate in Korea. This disease is known to have various reasons, including infection with Helicobacter pylori, dietary habits, tobacco, and a...

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대상 데이터

  • There were 1,885 patients and 6,957 normal subjects. First, for selecting the case, we eliminated 104 patients who were diagnosed under age 20 or had unknown age. Then, 1,781 patients remained.
  • Of these, 804 patients were men, and 977 patients were women. Of 6,957 normal subjects, no one was aged under 20; 3,335 were men, and 3,622 were women.
  • Then, 1,781 patients remained. Of these, 804 patients were men, and 977 patients were women. Of 6,957 normal subjects, no one was aged under 20; 3,335 were men, and 3,622 were women.
  • Detailed information of the KARE data was reported [10]. The KARE data included 8,842 individuals, 352,228 SNPs, and 277 phenotypes.
  • Among 8,842 total individuals, we divided patients and normal subjects for a control and case study using a positive diagnosis experience of gastritis. There were 1,885 patients and 6,957 normal subjects. First, for selecting the case, we eliminated 104 patients who were diagnosed under age 20 or had unknown age.

데이터처리

  • We also assessed the result factors of the logistic regression by Student’s t-test for revealing meaningful differences between patients and normal subjects using R version 3.0.2 for finding gastritis-associated factors.
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참고문헌 (18)

  1. 1 Dikshit RP Mathur G Mhatre S Yeole BB Epidemiological review of gastric cancer in India Indian J Med Paediatr Oncol 2011 32 3 11 21731209 

  2. 2 Jung KW Won YJ Kong HJ Oh CM Seo HG Lee JS Cancer statistics in Korea: incidence, mortality, survival and prevalence in 2010 Cancer Res Treat 2013 45 1 14 23613665 

  3. 3 Kim SJ Baik GH Youn KH Song SW Kim DJ Kim JB The crude incidence rate of stomach cancer in Chuncheon-si during 2000-2002 Korean J Med 2007 73 368 374 

  4. 4 Strickland RG Gastritis Springer Semin Immunopathol 1990 12 203 217 2205940 

  5. 5 Crew KD Neugut AI Epidemiology of gastric cancer World J Gastroenterol 2006 12 354 362 16489633 

  6. 6 Baik SJ Yi SY Park HS Park BH Seroprevalence of Helicobacter pylori in female Vietnamese immigrants to Korea World J Gastroenterol 2012 18 517 521 22363117 

  7. 7 Edgren G Hjalgrim H Rostgaard K Norda R Wikman A Melbye M Risk of gastric cancer and peptic ulcers in relation to ABO blood type: a cohort study Am J Epidemiol 2010 172 1280 1285 20937632 

  8. 8 Song HR Shin MH Kim HN Piao JM Choi JS Hwang JE Sex-specific differences in the association between ABO genotype and gastric cancer risk in a Korean population Gastric Cancer 2013 16 254 260 22865192 

  9. 9 Kim YJ Chung JW Lee SJ Choi KS Kim JH Hahm KB Progression from chronic atrophic gastritis to gastric cancer; tangle, toggle, tackle with Korea red ginseng J Clin Biochem Nutr 2010 46 195 204 20490314 

  10. 10 Cho YS Go MJ Kim YJ Heo JY Oh JH Ban HJ A large-scale genome-wide association study of Asian populations uncovers genetic factors influencing eight quantitative traits Nat Genet 2009 41 527 534 19396169 

  11. 11 Purcell S Neale B Todd-Brown K Thomas L Ferreira MA Bender D PLINK: a tool set for whole-genome association and population-based linkage analyses Am J Hum Genet 2007 81 559 575 17701901 

  12. 12 Verhaak PF Somatic disease and psychological disorder J Psychosom Res 1997 42 261 273 9130183 

  13. 13 Allison MC Howatson AG Torrance CJ Lee FD Russell RI Gastrointestinal damage associated with the use of nonsteroidal antiinflammatory drugs N Engl J Med 1992 327 749 754 1501650 

  14. 14 Forman D Burley VJ Gastric cancer: global pattern of the disease and an overview of environmental risk factors Best Pract Res Clin Gastroenterol 2006 20 633 649 16997150 

  15. 15 Emerging Risk Factors Collaboration Adult height and the risk of cause-specific death and vascular morbidity in 1 million people: individual participant meta-analysis Int J Epidemiol 2012 41 1419 1433 22825588 

  16. 16 Ambrose JA Tannenbaum MA Alexopoulos D Hjemdahl-Monsen CE Leavy J Weiss M Angiographic progression of coronary artery disease and the development of myocardial infarction J Am Coll Cardiol 1988 12 56 62 3379219 

  17. 17 Madhavan S Ooi WL Cohen H Alderman MH Relation of pulse pressure and blood pressure reduction to the incidence of myocardial infarction Hypertension 1994 23 395 401 8125567 

  18. 18 Goldstein JL Hazzard WR Schrott HG Bierman EL Motulsky AG Hyperlipidemia in coronary heart disease. I. Lipid levels in 500 survivors of myocardial infarction J Clin Invest 1973 52 1533 1543 4718952 

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