참고문헌 (31)

1. BIK, HOLLY M., SUNG, WAY, DE LEY, PAUL, BALDWIN, JAMES G., SHARMA, JYOTSNA, ROCHA‐OLIVARES, AXAYÁCATL, THOMAS, W. KELLEY. Metagenetic community analysis of microbial eukaryotes illuminates biogeographic patterns in deep‐sea and shallow water sediments. Molecular ecology, vol.21, no.5, 1048-1059.

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4. Burgess, R. An improved protocol for separating meiofauna from sediments using colloidal silica sols. Marine ecology progress series, vol.214, 161-165.

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6. Caporaso, J Gregory, Kuczynski, Justin, Stombaugh, Jesse, Bittinger, Kyle, Bushman, Frederic D, Costello, Elizabeth K, Fierer, Noah, Peña, Antonio Gonzalez, Goodrich, Julia K, Gordon, Jeffrey I, Huttley, Gavin A, Kelley, Scott T, Knights, Dan, Koenig, Jeremy E, Ley, Ruth E, Lozupone, Catherine A, McDonald, Daniel, Muegge, Brian D, Pirrung, Meg, Reeder, Jens, Sevinsky, Joel R, Turnbaugh, Peter J, Walters, William A, Widmann, Jeremy, Yatsunenko, Tanya, Zaneveld, Jesse, Knight, Rob. QIIME allows analysis of high-throughput community sequencing data. Nature methods, vol.7, no.5, 335-336.

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8. Chauhan, Ashvini, Wafula, Denis, Lewis, Dawn E., Pathak, Ashish. Metagenomic Assessment of the Eastern Oyster-Associated Microbiota. Genome announcements, vol.2, no.5, e01083-14-e01083-14.

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9. Costello, Mark John, Coll, Marta, Danovaro, Roberto, Halpin, Pat, Ojaveer, Henn, Miloslavich, Patricia. A Census of Marine Biodiversity Knowledge, Resources, and Future Challenges. PloS one, vol.5, no.8, e12110-.

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10. Cuvelier, Marie L., Allen, Andrew E., Monier, Adam, McCrow, John P., Messié, Monique, Tringe, Susannah G., Woyke, Tanja, Welsh, Rory M., Ishoey, Thomas, Lee, Jae-Hyeok, Binder, Brian J., DuPont, Chris L., Latasa, Mikel, Guigand, Cédric, Buck, Kurt R., Hilton, Jason, Thiagarajan, Mathangi, Caler, Elisabet, Read, Betsy, Lasken, Roger S., Chavez, Francisco P., Worden, Alexandra Z.. Targeted metagenomics and ecology of globally important uncultured eukaryotic phytoplankton. Proceedings of the National Academy of Sciences of the United States of America, vol.107, no.33, 14679-14684.

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11. Faria, Daphne Georgina, Lee, Man-Duck, Lee, Joon-Baek, Lee, Juyun, Chang, Man, Youn, Seok Hyun, Suh, Young Sang, Ki, Jang-Seu. Molecular diversity of phytoplankton in the East China Sea around Jeju Island (Korea), unraveled by pyrosequencing. Journal of oceanography, vol.70, no.1, 11-23.

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12. Gray, JS, Wu, RS, Or, YY. Effects of hypoxia and organic enrichment on the coastal marine environment. Marine ecology progress series, vol.238, 249-279.

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13. Hajibabaei, Mehrdad, Shokralla, Shadi, Zhou, Xin, Singer, Gregory A. C., Baird, Donald J.. Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos. PloS one, vol.6, no.4, e17497-.

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14. Hirai, J., Kuriyama, M., Ichikawa, T., Hidaka, K., Tsuda, A.. A metagenetic approach for revealing community structure of marine planktonic copepods. Molecular ecology resources, vol.15, no.1, 68-80.

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15. Jansen, Amy. Terrestrial Invertebrate Community Structure as an Indicator of the Success of a Tropical Rainforest Restoration Project. Restoration ecology : the journal of the Society for Ecological Restoration, vol.5, no.2, 115-124.

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16. Bradley, P.C. Sylvester. I.-The shell structure of the Ostracoda and its Application to their Palæontological investigation. The Annals and magazine of natural history, vol.8, no.43, 1-33.

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17. King, Gary M., Judd, Craig, Kuske, Cheryl R., Smith, Conor. Analysis of Stomach and Gut Microbiomes of the Eastern Oyster ( Crassostrea virginica ) from Coastal Louisiana, USA. PloS one, vol.7, no.12, e51475-.

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19. Nilsson, HC, Rosenberg, R. Succession in marine benthic habitats and fauna in response to oxygen deficiency:analysed by sediment profile-imaging and by grab samples. Marine ecology progress series, vol.197, 139-149.

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20. PORAZINSKA, DOROTA L., GIBLIN‐DAVIS, ROBIN M., FALLER, LINA, FARMERIE, WILLIAM, KANZAKI, NATSUMI, MORRIS, KRYSTALYNNE, POWERS, THOMAS O., TUCKER, ABRAHAM E., SUNG, WAY, THOMAS, W. KELLEY. Evaluating high‐throughput sequencing as a method for metagenomic analysis of nematode diversity. Molecular ecology resources, vol.9, no.6, 1439-1450.

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21. PORAZINSKA, DOROTA L., GIBLIN‐DAVIS, ROBIN M., ESQUIVEL, ALEJANDRO, POWERS, THOMAS O., SUNG, WAY, THOMAS, W. KELLEY. Ecometagenetics confirm high tropical rainforest nematode diversity. Molecular ecology, vol.19, no.24, 5521-5530.

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22. PORAZINSKA, DOROTA L., SUNG, WAY, GIBLIN‐DAVIS, ROBIN M., THOMAS, W. KELLEY. Reproducibility of read numbers in high‐throughput sequencing analysis of nematode community composition and structure. Molecular ecology resources, vol.10, no.4, 666-676.

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24. Rho, Hyun-Soo, Kim, Won. Tenuidraconema koreensis, a New Species of Marine Nematodes (Adenophorea: Desmodorida) from South Korea. Korean journal of biological sciences, vol.8, no.3, 155-163.

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26. Shoemaker, Craig A., LaFrentz, Benjamin R.. Growth and survival of the fish pathogenic bacterium, Flavobacterium columnare, in tilapia mucus and porcine gastric mucin. FEMS microbiology letters, vol.362, no.4, 1-5.

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27. Tian, Yongjun, Kidokoro, Hideaki, Watanabe, Tatsuro. Long-term changes in the fish community structure from the Tsushima warm current region of the Japan/East Sea with an emphasis on the impacts of fishing and climate regime shift over the last four decades. Progress in oceanography, vol.68, no.2, 217-237.

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28. Wang, Yawei, Liang, Lina, Shi, Jianbo, Jiang, Guibin. Study on the contamination of heavy metals and their correlations in mollusks collected from coastal sites along the Chinese Bohai Sea. Environment international, vol.31, no.8, 1103-1113.

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29. Worden, A.Z., Janouskovec, J., McRose, D., Engman, A., Welsh, R.M., Malfatti, S., Tringe, S.G., Keeling, P.J.. Global distribution of a wild alga revealed by targeted metagenomics. Current biology : CB, vol.22, no.17, R675-R677.

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30. Yu, Douglas W., Ji, Yinqiu, Emerson, Brent C., Wang, Xiaoyang, Ye, Chengxi, Yang, Chunyan, Ding, Zhaoli. Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring. Methods in ecology and evolution, vol.3, no.4, 613-623.

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31. Zimmermann, Jonas, Jahn, Regine, Gemeinholzer, Birgit. Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols. Organisms, diversity, & evolution, vol.11, no.3, 173-192.

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