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Characterization of cellular states of CHO-K1 suspension cell culture through cell cycle and RNA-sequencing profiling 원문보기

Journal of biotechnology, v.286, 2018년, pp.56 - 67  

Tossolini, Ileana (UNL, CONICET, Cell Culture Laboratory, FBCB, Edificio FBCB-Ciudad Universitaria UNL, C.C. 242. (S3000ZAA), Santa Fe, Argentina) ,  López-Díaz, Fernando J. (Regulatory Biology Laboratory, Salk Institute for Biological Studies, 10010 N. Torrey Pines Road, La Jolla, CA, 92037, USA) ,  Kratje, Ricardo (UNL, CONICET, Cell Culture Laboratory, FBCB, Edificio FBCB-Ciudad Universitaria UNL, C.C. 242. (S3000ZAA), Santa Fe, Argentina) ,  Prieto, Claudio C. (UNL, Cell Culture Laboratory and Biotechnological Development Laboratory, FBCB, Edificio FBCB-Ciudad Universitaria UNL, C.C. 242. (S3000ZAA), Santa Fe, Argentina)

Abstract AI-Helper 아이콘AI-Helper

Abstract Chinese hamster ovary (CHO) derived cell lines are the preferred host system for the production of therapeutic proteins. The aim of this work was to explore the regulation of suspension-adapted CHO-K1 host cell line bioprocesses, especially under a temperature gradient from 37 °C to 31...

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참고문헌 (65)

  1. J. Biotechnol. al-Rubeai 16 67 1990 10.1016/0168-1656(90)90066-K Mechanisms and kinetics of monoclonal antibody synthesis and secretion in synchronous and asynchronous hybridoma cell cultures 

  2. Cytotechnology al-Rubeai 9 85 1992 10.1007/BF02521735 Specific monoclonal antibody productivity and the cell cycle-comparisons of batch, continuous and perfusion cultures 

  3. Andrews 2010 FastQC: A Quality Control Tool for High Throughput Sequence Data 

  4. Biotechnol. Bioeng. Baik 93 361 2006 10.1002/bit.20717 Initial transcriptome and proteome analyses of low culture temperature-induced expression in CHO cells producing erythropoietin 

  5. J. Proteome Res. Baycin-Hizal 11 5265 2012 10.1021/pr300476w Proteomic analysis of Chinese hamster ovary cells 

  6. J. Biotechnol. Becker 156 227 2011 10.1016/j.jbiotec.2011.09.014 Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing 

  7. Biotechnol. Bioeng. Bi 85 741 2004 10.1002/bit.20025 Uncoupling of cell growth and proliferation results in enhancement of productivity in p21CIP1-arrested CHO cells 

  8. Bioinformatics Bolger 30 2114 2014 10.1093/bioinformatics/btu170 Trimmomatic: a flexible trimmer for illumina sequence data 

  9. Biotechnol. Prog. Bollati-Fogolin 21 17 2008 10.1021/bp049825t Temperature reduction in cultures of hGM-CSF-expressing CHO cells: effect on productivity and product quality 

  10. Nat. Biotechnol. Brinkrolf 31 694 2013 10.1038/nbt.2645 Chinese hamster genome sequenced from sorted chromosomes 

  11. Curr. Opin. Biotechnol. Butler 30 107 2014 10.1016/j.copbio.2014.06.010 The choice of mammalian cell host and possibilities for glycosylation engineering 

  12. Proc. Natl. Acad. Sci. U. S. A. Chang 97 4291 2000 10.1073/pnas.97.8.4291 Effects of p21Waf1/Cip1/Sdi1 on cellular gene expression: implications for carcinogenesis, senescence, and age-related diseases 

  13. J. Biol. Chem. Chappell 276 36917 2001 10.1074/jbc.M106008200 A 5′ leader of Rbm3, a cold stress-induced mRNA, mediates internal initiation of translation with increased efficiency under conditions of mild hypothermia 

  14. Am. J. Pathol. Danno 156 1685 2000 10.1016/S0002-9440(10)65039-0 Decreased expression of mouse Rbm3, a cold-shock protein, in sertoli cells of cryptorchid testis 

  15. Darzynkiewicz 2001 Current Protocols in Cell Biology Determining cell cycle stages by flow cytometry 

  16. Bioinformatics de Hoon 20 1453 2004 10.1093/bioinformatics/bth078 Open source clustering software 

  17. Biochim. Biophys. Acta - Bioenergy Diaz-Ruiz 1807 568 2011 10.1016/j.bbabio.2010.08.010 The Warburg and Crabtree effects: on the origin of cancer cell energy metabolism and of yeast glucose repression 

  18. Bioinformatics Dobin 29 15 2013 10.1093/bioinformatics/bts635 STAR: ultrafast universal RNA-seq aligner 

  19. Proc. Natl. Acad. Sci. Dresios 102 1865 2005 10.1073/pnas.0409764102 Cold stress-induced protein Rbm3 binds 60S ribosomal subunits, alters microRNA levels, and enhances global protein synthesis 

  20. Biotechnol. Bioeng. Du 112 141 2015 10.1002/bit.25332 Use of a small molecule cell cycle inhibitor to control cell growth and improve specific productivity and product quality of recombinant proteins in CHO cell cultures 

  21. Curr. Opin. Biotechnol. Durocher 20 700 2009 10.1016/j.copbio.2009.10.008 Expression systems for therapeutic glycoprotein production 

  22. Cytotechnology Dutton 52 55 2006 10.1007/s10616-006-9041-4 Cell cycle phase dependent productivity of a recombinant Chinese hamster ovary cell line 

  23. Biotechnol. J. Ernst 1 639 2006 10.1002/biot.200600010 Evaluation of a genomics platform for cross-species transcriptome analysis of recombinant CHO cells 

  24. Biotechnol. Bioeng. Europa 67 25 2000 10.1002/(SICI)1097-0290(20000105)67:1<25::AID-BIT4>3.0.CO;2-K Multiple steady states with distinct cellular metabolism in continuous culture of mammalian cells 

  25. J. Proteome Res. Farrell 13 3144 2014 10.1021/pr500219b Application of multi-omics techniques for bioprocess design and optimization in Chinese Hamster ovary cells 

  26. Nat. Biotechnol. Fussenegger 16 468 1998 10.1038/nbt0598-468 Controlled proliferation by multigene metabolic engineering enhances the productivity of Chinese hamster ovary cells 

  27. Biotechnol. Genet. Eng. Rev. Ghaderi 28 147 2012 10.5661/bger-28-147 Production platforms for biotherapeutic glycoproteins. Occurrence, impact, and challenges of non-human sialylation 

  28. Goff 2014 CummeRbund: Visualization and Exploration of Cufflinks High-throughput Sequencing Data 

  29. Biotechnol. J. Harreither 10 1625 2015 10.1002/biot.201400857 Microarray profiling of preselected CHO host cell subclones identifies gene expression patterns associated with in-creased production capacity 

  30. Mol. Cell Heinz 38 576 2010 10.1016/j.molcel.2010.05.004 Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities 

  31. Biotechnol. Prog. Ibarra 19 224 2003 10.1021/bp025589f Modulation of cell cycle for enhancement of antibody productivity in perfusion culture of NS0 cells 

  32. Chem. Eng. Prog. Jayapal 103 7 40 2007 Recombinant protein therapeutics from CHO cells - 20 years and counting 

  33. Nucleic Acids Res. Kanehisa 28 27 2000 10.1093/nar/28.1.27 KEGG: kyoto encyclopedia of genes and genomes 

  34. Biotechnol. Bioeng. Kaufmann 63 573 1999 10.1002/(SICI)1097-0290(19990605)63:5<573::AID-BIT7>3.0.CO;2-Y Influence of low temperature on productivity, proteome and protein phosphorylation of CHO cells 

  35. Biotechnol. Bioengy Kaufmann 72 592 2001 10.1002/1097-0290(20010320)72:6<592::AID-BIT1024>3.0.CO;2-J Comparative analysis of two controlled proliferation strategies regarding product quality, influence on tetracycline-regulated gene expression, and productivity 

  36. Nat. Rev. Genet. Kim 15 321 2014 10.1038/nrg3686 A guide to genome engineering with programmable nucleases 

  37. Appl. Microbiol. Biotechnol. Kim 93 917 2012 10.1007/s00253-011-3758-5 CHO cells in biotechnology for production of recombinant proteins: current state and further potential 

  38. Cell Cycle Kostyrko 14 2853 2015 10.1080/15384101.2015.1049784 A role for homologous recombination proteins in cell cycle regulation 

  39. BMC Biotechnol. Kumar 8 42 2008 10.1186/1472-6750-8-42 Differential protein expression following low temperature culture of suspension CHO-K1 cells 

  40. Pharmaceuticals (Basel) Lai 6 579 2013 10.3390/ph6050579 Advances in Mammalian cell line development technologies for recombinant protein production 

  41. ACS Synth. Biol. Lee 5 2016 10.1021/acssynbio.5b00249 Targeted gene deletion using DNA-Free RNA-Guided Cas9 nuclease accelerates adaptation of CHO cells to suspension culture 

  42. Nat. Biotechnol. Lewis 31 759 2013 10.1038/nbt.2624 Genomic landscapes of Chinese hamster ovary cell lines as revealed by the Cricetulus griseus draft genome 

  43. Methods Livak 25 402 2001 10.1006/meth.2001.1262 Analysis of relative gene expression data using real-time quantitative PCR and the 2?ΔΔCT method 

  44. Bioinformatics Luo 29 14 1830 2013 10.1093/bioinformatics/btt285 Pathview: an R/Bioconductor package for pathway-based data integration and visualization 

  45. Cytotechnology Moore 23 47 1997 10.1023/A:1007919921991 Effects of temperature shift on cell cycle, apoptosis and nucleotide pools in CHO cell batch cultures 

  46. Trends Biotechnol. Mulukutla 28 476 2010 10.1016/j.tibtech.2010.06.005 Glucose metabolism in mammalian cell culture: new insights for tweaking vintage pathways 

  47. Metab. Eng. Mulukutla 14 138 2012 10.1016/j.ymben.2011.12.006 On metabolic shift to lactate consumption in fed-batch culture of mammalian cells 

  48. J. Cell Biol. Nishiyama 137 899 1997 10.1083/jcb.137.4.899 A glycine-rich RNA-binding protein mediating cold-inducible suppression of mammalian cell growth 

  49. Mol. Biotechnol. Nissom 34 125 2006 10.1385/MB:34:2:125 Transcriptome and proteome profiling to understanding the biology of high productivity CHO cells 

  50. Bioimpacts Pourhassan-Moghaddam 2 55 2012 Promoters of cancer genes for recombinant protein expression in human cancer cell lines 

  51. J. Pharm. Sci. Rodney 103 71 2014 10.1002/jps.23761 Trends in translational medicine and drug targeting and delivery: new insights on an old concept-targeted drug delivery with antibody-drug conjugates for cancers 

  52. Bioinformatics Saldanha 20 3246 2004 10.1093/bioinformatics/bth349 Java Treeview--extensible visualization of microarray data 

  53. Biotechnol. Appl. Biochem. Tan 49 247 2008 10.1042/BA20070032 Overexpression of cold-inducible RNA-binding protein increases interferon-γ production in Chinese-hamster ovary cells 

  54. Genome Res. Thomas 13 2129 2003 10.1101/gr.772403 PANTHER: a library of protein families and subfamilies indexed by function 

  55. Nat. Protoc. Trapnell 7 562 2012 10.1038/nprot.2012.016 Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks 

  56. Biotechnol. Bioeng. Trummer 94 1045 2006 10.1002/bit.20958 Process parameter shifting: part II. Biphasic cultivation - a tool for enhancing the volumetric productivity of batch processes using Epo-Fc expressing CHO cells 

  57. PLoS One Vergara 9 e93865 2014 10.1371/journal.pone.0093865 Differential effect of culture temperature and specific growth rate on CHO cell behavior in chemostat culture 

  58. Appl. Biochem. Biotechnol. Walther 178 1286 2016 10.1007/s12010-015-1945-z Importance of interaction between integrin and actin cytoskeleton in suspension adaptation of CHO cells 

  59. Nat. Biotechnol. Xu 29 735 2011 10.1038/nbt.1932 The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell line 

  60. Biotechnol. Prog. Yang 30 616 2014 10.1002/btpr.1884 Perfusion seed cultures improve biopharmaceutical fed-batch production capacity and product quality 

  61. Biotechnol. Bioeng. Yee 99 1186 2008 10.1002/bit.21665 Genomic and proteomic exploration of CHO and hybridoma cells under sodium butyrate treatment 

  62. Biotechnol. Bioeng. Yee 102 246 2009 10.1002/bit.22039 Comparative transcriptome analysis to unveil genes affecting recombinant protein productivity in mammalian cells 

  63. Biotechnol. Bioeng. Yoon 82 289 2003 10.1002/bit.10566 Effect of low culture temperature on specific productivity, transcription level, and heterogeneity of erythropoietin in Chinese hamster ovary cells 

  64. Biotechnol. Bioeng. Zhou 46 579 1995 10.1002/bit.260460611 High viable cell concentration fed-batch cultures of hybridoma cells through on-line nutrient feeding 

  65. Cytotechnology Zhou 24 99 1997 10.1023/A:1007945826228 Alteration of mammalian cell metabolism by dynamic nutrient feeding 

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